Strain Fitness in Escherichia coli BW25113 around b3538

Experiment: Benzalkonium Chloride 0.004 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Benzalkonium Chloride 0.004 mg/ml
3,695,251	+	bcsE	b3536	0.49	-1.6
3,695,251	+	bcsE	b3536	0.49	+0.6
3,695,251	+	bcsE	b3536	0.49	+0.8
3,695,305	+	bcsE	b3536	0.52	+0.9
3,695,336	-	bcsE	b3536	0.54	+2.3
3,695,336	-	bcsE	b3536	0.54	+0.3
3,695,336	-	bcsE	b3536	0.54	+0.8
3,695,336	-	bcsE	b3536	0.54	-0.3
3,695,336	-	bcsE	b3536	0.54	-1.8
3,695,336	-	bcsE	b3536	0.54	-0.8
3,695,352	+	bcsE	b3536	0.55	+0.6
3,695,385	-	bcsE	b3536	0.58	+2.8
3,695,460	-	bcsE	b3536	0.62	-1.6
3,695,462	-	bcsE	b3536	0.62	-0.6
3,695,462	-	bcsE	b3536	0.62	+1.9
3,695,472	+	bcsE	b3536	0.63	-0.2
3,695,480	-	bcsE	b3536	0.64	-2.8
3,695,480	-	bcsE	b3536	0.64	-0.8
3,695,520	+	bcsE	b3536	0.66	+0.2
3,695,567	-	bcsE	b3536	0.69	-2.6
3,695,567	-	bcsE	b3536	0.69	-0.1
3,695,581	+	bcsE	b3536	0.70	+1.4
3,695,582	-	bcsE	b3536	0.70	+1.1
3,695,583	+	bcsE	b3536	0.70	-0.5
3,695,591	+	bcsE	b3536	0.71	+0.4
3,695,596	+	bcsE	b3536	0.71	+1.8
3,695,632	+	bcsE	b3536	0.73	-3.9
3,695,637	-	bcsE	b3536	0.74	+2.1
3,695,637	-	bcsE	b3536	0.74	+2.8
3,695,638	-	bcsE	b3536	0.74	+0.2
3,695,644	+	bcsE	b3536	0.74	+1.4
3,695,644	+	bcsE	b3536	0.74	-1.0
3,695,700	+	bcsE	b3536	0.78	+2.6
3,695,757	+	bcsE	b3536	0.81	+1.4
3,695,814	+	bcsE	b3536	0.85	-0.7
3,695,871	-	bcsE	b3536	0.88	+0.1
3,695,894	+	bcsE	b3536	0.90	+0.9
3,695,902	-				-2.2
3,695,902	-				+0.5
3,695,902	-				-0.0
3,695,926	+				+1.9
3,695,928	-				+0.6
3,695,938	+				+0.9
3,695,952	+				+0.5
3,695,952	+				+1.6
3,695,965	+				+0.5
3,695,985	+				-0.9
3,695,994	+				+1.9
3,696,022	+				+0.2
3,696,022	+				-2.0
3,696,032	+				-1.0
3,696,124	-	yhjT	b3537	0.39	+0.2
3,696,124	-	yhjT	b3537	0.39	+2.1
3,696,131	+	yhjT	b3537	0.43	+1.4
3,696,131	+	yhjT	b3537	0.43	+0.3
3,696,199	+	yhjT	b3537	0.78	+0.5
3,696,205	-	yhjT	b3537	0.81	-0.6
3,696,268	+				+0.8
3,696,292	-				-2.1
3,696,338	+				-1.1
3,696,338	+				-1.4
3,696,346	-				+2.5
3,696,346	-				-0.2
3,696,352	+				-0.8
3,696,416	+	bcsG	b3538	0.11	-1.4
3,696,416	+	bcsG	b3538	0.11	+1.8
3,696,416	+	bcsG	b3538	0.11	-1.0
3,696,431	-	bcsG	b3538	0.12	+0.9
3,696,445	-	bcsG	b3538	0.12	-0.6
3,696,450	-	bcsG	b3538	0.13	+0.4
3,696,473	-	bcsG	b3538	0.14	-0.2
3,696,473	-	bcsG	b3538	0.14	+1.8
3,696,473	-	bcsG	b3538	0.14	-1.2
3,696,504	-	bcsG	b3538	0.16	-0.2
3,696,519	+	bcsG	b3538	0.17	+0.8
3,696,544	-	bcsG	b3538	0.18	+0.8
3,696,581	-	bcsG	b3538	0.20	+0.2
3,696,630	-	bcsG	b3538	0.23	+0.8
3,696,677	-	bcsG	b3538	0.26	-1.4
3,696,677	-	bcsG	b3538	0.26	-1.0
3,696,681	-	bcsG	b3538	0.26	+1.2
3,696,714	+	bcsG	b3538	0.28	+0.4
3,696,753	-	bcsG	b3538	0.31	-1.3
3,696,753	-	bcsG	b3538	0.31	+1.2
3,696,771	-	bcsG	b3538	0.32	-0.4
3,696,771	-	bcsG	b3538	0.32	+2.0
3,696,804	+	bcsG	b3538	0.34	+0.8
3,696,804	+	bcsG	b3538	0.34	-0.8
3,696,829	-	bcsG	b3538	0.35	+2.4
3,696,833	+	bcsG	b3538	0.35	-0.4
3,696,833	+	bcsG	b3538	0.35	+0.9
3,696,851	+	bcsG	b3538	0.37	+0.7
3,696,925	+	bcsG	b3538	0.41	-0.5
3,696,950	+	bcsG	b3538	0.42	+2.2
3,696,980	+				+0.2
3,696,989	-	bcsG	b3538	0.45	-0.2
3,697,005	-	bcsG	b3538	0.46	-2.2
3,697,005	-	bcsG	b3538	0.46	-1.9
3,697,052	+	bcsG	b3538	0.49	+0.8
3,697,061	+	bcsG	b3538	0.49	+0.0
3,697,062	+	bcsG	b3538	0.49	-0.2
3,697,067	-	bcsG	b3538	0.49	+1.4
3,697,069	-	bcsG	b3538	0.50	-0.0
3,697,072	+	bcsG	b3538	0.50	+1.4
3,697,084	+	bcsG	b3538	0.50	+2.1
3,697,116	+	bcsG	b3538	0.52	+0.8
3,697,120	+	bcsG	b3538	0.53	+1.8
3,697,128	-	bcsG	b3538	0.53	-1.6
3,697,138	-	bcsG	b3538	0.54	+3.2
3,697,326	+	bcsG	b3538	0.65	-2.8
3,697,336	+	bcsG	b3538	0.65	+2.4
3,697,339	+	bcsG	b3538	0.66	-1.6
3,697,339	+	bcsG	b3538	0.66	-0.8
3,697,344	+	bcsG	b3538	0.66	-1.8
3,697,352	-	bcsG	b3538	0.66	+1.0
3,697,395	-	bcsG	b3538	0.69	-0.8
3,697,395	-	bcsG	b3538	0.69	+3.6
3,697,401	-	bcsG	b3538	0.69	-0.7
3,697,401	-	bcsG	b3538	0.69	-1.2
3,697,408	+	bcsG	b3538	0.70	+0.6
3,697,419	-	bcsG	b3538	0.70	-1.9
3,697,433	-	bcsG	b3538	0.71	-0.2
3,697,441	-	bcsG	b3538	0.72	+0.3
3,697,441	-	bcsG	b3538	0.72	+2.4
3,697,547	-	bcsG	b3538	0.78	+1.2
3,697,560	+	bcsG	b3538	0.79	+2.5
3,697,568	-	bcsG	b3538	0.79	+0.5
3,697,570	-	bcsG	b3538	0.79	-1.5
3,697,607	+	bcsG	b3538	0.82	+0.5
3,697,607	+	bcsG	b3538	0.82	-1.8
3,697,615	+	bcsG	b3538	0.82	-1.5
3,697,615	+	bcsG	b3538	0.82	-0.2
3,697,677	+	bcsG	b3538	0.86	+0.0
3,697,736	+	bcsG	b3538	0.89	+0.8
3,697,861	+				+1.5
3,697,886	-				-1.4
3,697,886	-				+1.8
3,697,945	+				+0.2
3,697,945	+				-1.2
3,698,018	+	ldrD	b4453	0.14	+1.6
3,698,052	+	ldrD	b4453	0.45	-1.0
3,698,055	-	ldrD	b4453	0.48	-0.8
3,698,103	-				-1.5
3,698,103	-				-0.5
3,698,107	+				-0.4
3,698,158	+				-1.7
3,698,158	+				-0.3
3,698,158	+				+0.6
3,698,158	+				+1.3
3,698,165	+				+0.5
3,698,165	+				+1.7
3,698,166	-	rdlD	b4454	0.11	-1.0
3,698,178	-	rdlD	b4454	0.29	-2.5
3,698,185	+	rdlD	b4454	0.39	+0.7
3,698,190	+	rdlD	b4454	0.47	-0.3
3,698,195	+	rdlD	b4454	0.55	-1.4
3,698,195	+	rdlD	b4454	0.55	+0.6
3,698,195	+	rdlD	b4454	0.55	-0.8
3,698,195	+	rdlD	b4454	0.55	+0.8
3,698,257	-				+0.5
3,698,260	+				+2.2
3,698,277	+				+2.5
3,698,318	+				-1.7
3,698,333	+				-0.1
3,698,333	+				-1.8
3,698,340	+				+3.0
3,698,407	-				-0.8
3,698,410	+				-2.3
3,698,410	+				+2.2
3,698,410	+				+2.1
3,698,410	+				-0.4
3,698,411	+				+0.9
3,698,418	-				+0.8
3,698,418	-				+0.0
3,698,418	-				+0.0
3,698,429	-				+0.8
3,698,429	-				-0.5
3,698,429	-				-1.0
3,698,452	+				+1.6
3,698,452	-				-0.2
3,698,473	+				-1.5
3,698,474	-				+0.2
3,698,474	-				+0.6
3,698,487	+				+1.6
3,698,487	+				+0.8
3,698,501	+				+3.0
3,698,501	+				-0.5
3,698,503	+				+1.0
3,698,503	+				-1.8
3,698,507	-				-0.4
3,698,519	-				+1.8
3,698,533	-				-0.2
3,698,533	-				+0.8
3,698,533	-				-1.5
3,698,589	-				+1.9
3,698,591	+				+0.5
3,698,591	+				-0.5
3,698,593	+				-1.2
3,698,607	-				+1.6
3,698,612	-				-0.2
3,698,632	+				-1.8
3,698,632	+				+1.2
3,698,634	+				+1.6
3,698,640	+				-0.4
3,698,642	-				-0.2
3,698,660	+				-1.8
3,698,660	+				-0.5
3,698,667	+				-0.7
3,698,681	+				+1.1
3,698,681	+				+1.6
3,698,683	+				-2.3
3,698,683	+				-0.5
3,698,689	+				+0.4
3,698,690	-				+1.6
3,698,691	+				+0.8
3,698,691	+				-1.5
3,698,693	+				-1.2
3,698,694	-				+0.7
3,698,696	-				-0.0
3,698,696	-				+1.0
3,698,699	-				-0.2
3,698,699	-				-0.5
3,698,699	-				-1.5
3,698,701	-				+0.5
3,698,715	-	yhjV	b3539	0.10	+1.0
3,698,755	-	yhjV	b3539	0.13	-0.9
3,698,760	+	yhjV	b3539	0.14	+0.8
3,698,760	-	yhjV	b3539	0.14	-2.8
3,698,760	-	yhjV	b3539	0.14	-0.1
3,698,761	-	yhjV	b3539	0.14	+0.8
3,698,761	-	yhjV	b3539	0.14	+1.4
3,698,765	+	yhjV	b3539	0.14	+0.2
3,698,765	+	yhjV	b3539	0.14	+1.7
3,698,765	+	yhjV	b3539	0.14	+0.7
3,698,765	+	yhjV	b3539	0.14	-1.4
3,698,765	+	yhjV	b3539	0.14	-1.9
3,698,773	-	yhjV	b3539	0.15	+1.8
3,698,773	-	yhjV	b3539	0.15	-1.3
3,698,773	-	yhjV	b3539	0.15	+0.6
3,698,773	-	yhjV	b3539	0.15	-1.5
3,698,775	+	yhjV	b3539	0.15	+1.0
3,698,783	+	yhjV	b3539	0.15	+1.3
3,698,783	-	yhjV	b3539	0.15	+0.2
3,698,783	-	yhjV	b3539	0.15	+0.5
3,698,783	-	yhjV	b3539	0.15	+2.4
3,698,822	+	yhjV	b3539	0.19	-1.0
3,698,847	+	yhjV	b3539	0.21	-2.1
3,698,850	-	yhjV	b3539	0.21	-2.2
3,698,850	-	yhjV	b3539	0.21	+1.8
3,698,856	-	yhjV	b3539	0.21	-1.5
3,698,909	-	yhjV	b3539	0.25	+2.6
3,698,909	-	yhjV	b3539	0.25	-0.0