Strain Fitness in Escherichia coli BW25113 around b2779
Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,904,015 | - | ygcG | b2778 | 0.32 | -2.5 |
2,904,015 | - | ygcG | b2778 | 0.32 | -1.5 |
2,904,017 | + | ygcG | b2778 | 0.33 | -0.7 |
2,904,017 | + | ygcG | b2778 | 0.33 | +0.3 |
2,904,017 | - | ygcG | b2778 | 0.33 | -2.0 |
2,904,027 | - | ygcG | b2778 | 0.34 | -1.3 |
2,904,045 | + | ygcG | b2778 | 0.36 | -0.8 |
2,904,061 | + | ygcG | b2778 | 0.38 | -1.4 |
2,904,107 | + | ygcG | b2778 | 0.43 | +1.9 |
2,904,113 | + | ygcG | b2778 | 0.44 | +0.1 |
2,904,167 | + | ygcG | b2778 | 0.50 | +1.2 |
2,904,205 | + | ygcG | b2778 | 0.54 | +1.7 |
2,904,209 | + | ygcG | b2778 | 0.55 | -0.5 |
2,904,439 | - | ygcG | b2778 | 0.81 | +0.1 |
2,904,485 | - | ygcG | b2778 | 0.86 | -0.2 |
2,904,485 | - | ygcG | b2778 | 0.86 | +0.3 |
2,904,485 | - | ygcG | b2778 | 0.86 | +2.0 |
2,904,492 | + | ygcG | b2778 | 0.87 | -0.2 |
2,904,503 | - | ygcG | b2778 | 0.88 | -0.7 |
2,904,503 | - | ygcG | b2778 | 0.88 | +0.3 |
2,904,513 | + | ygcG | b2778 | 0.89 | -2.5 |
2,904,525 | + | -1.0 | |||
2,904,528 | + | +0.3 | |||
2,904,573 | + | +1.1 | |||
2,904,603 | - | -0.1 | |||
2,904,665 | - | -0.7 |
Or see this region's nucleotide sequence