Strain Fitness in Escherichia coli BW25113 around b2585
Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,719,852 | - | yfiQ | b2584 | 0.71 | +0.1 |
2,719,931 | - | yfiQ | b2584 | 0.74 | -0.2 |
2,720,013 | + | yfiQ | b2584 | 0.77 | -0.2 |
2,720,013 | + | yfiQ | b2584 | 0.77 | -0.6 |
2,720,093 | - | yfiQ | b2584 | 0.80 | +1.1 |
2,720,105 | - | yfiQ | b2584 | 0.80 | -0.6 |
2,720,235 | - | yfiQ | b2584 | 0.85 | -0.6 |
2,720,288 | - | yfiQ | b2584 | 0.87 | +2.0 |
2,720,288 | - | yfiQ | b2584 | 0.87 | -0.2 |
2,720,368 | + | yfiQ | b2584 | 0.90 | +1.4 |
2,720,434 | - | +1.0 | |||
2,720,438 | + | +3.4 | |||
2,720,440 | - | +0.8 | |||
2,720,440 | - | +0.4 | |||
2,720,545 | + | +1.4 | |||
2,720,545 | + | +1.8 | |||
2,720,642 | - | +2.4 | |||
2,721,348 | + | pssA | b2585 | 0.44 | +0.4 |
2,722,110 | + | +1.0 | |||
2,722,113 | - | -0.3 | |||
2,722,115 | + | +0.6 | |||
2,722,171 | + | +1.5 | |||
2,722,227 | + | yfiM | b2586 | 0.24 | -1.2 |
2,722,332 | + | yfiM | b2586 | 0.56 | -1.6 |
2,722,387 | - | yfiM | b2586 | 0.73 | +2.0 |
2,722,415 | + | yfiM | b2586 | 0.82 | -2.1 |
2,722,435 | + | yfiM | b2586 | 0.88 | -1.6 |
2,722,539 | - | -3.0 | |||
2,722,539 | - | -0.2 | |||
2,722,557 | + | -2.0 | |||
2,722,557 | + | +2.3 | |||
2,722,570 | + | -1.8 | |||
2,722,604 | - | kgtP | b2587 | 0.10 | +0.0 |
2,722,604 | - | kgtP | b2587 | 0.10 | +0.4 |
2,722,633 | + | kgtP | b2587 | 0.13 | +2.1 |
2,722,641 | - | kgtP | b2587 | 0.13 | +3.0 |
2,722,783 | + | kgtP | b2587 | 0.24 | +3.4 |
2,722,801 | + | kgtP | b2587 | 0.25 | +0.1 |
2,722,943 | + | kgtP | b2587 | 0.36 | +1.0 |
2,722,943 | + | kgtP | b2587 | 0.36 | +1.9 |
2,723,060 | - | kgtP | b2587 | 0.45 | +2.5 |
2,723,060 | - | kgtP | b2587 | 0.45 | +1.9 |
Or see this region's nucleotide sequence