Strain Fitness in Escherichia coli BW25113 around b2560
Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,694,969 | + | mltF | b2558 | 0.74 | -3.5 |
2,694,971 | + | mltF | b2558 | 0.74 | -0.6 |
2,694,976 | + | mltF | b2558 | 0.74 | +0.2 |
2,695,086 | + | mltF | b2558 | 0.81 | -0.5 |
2,695,109 | + | mltF | b2558 | 0.83 | -1.6 |
2,695,125 | + | mltF | b2558 | 0.84 | -1.4 |
2,695,138 | - | mltF | b2558 | 0.84 | -3.1 |
2,695,203 | - | mltF | b2558 | 0.89 | -0.5 |
2,695,203 | - | mltF | b2558 | 0.89 | +0.5 |
2,695,252 | + | -0.2 | |||
2,695,252 | + | -0.6 | |||
2,695,256 | - | +1.2 | |||
2,695,260 | - | -1.1 | |||
2,695,328 | + | -0.6 | |||
2,695,365 | - | -0.9 | |||
2,695,945 | - | +1.1 | |||
2,695,945 | - | -1.4 | |||
2,695,966 | + | -1.3 | |||
2,695,966 | + | -0.0 | |||
2,695,968 | + | +1.0 | |||
2,695,968 | + | +1.4 | |||
2,696,004 | + | yfhB | b2560 | 0.11 | +1.0 |
2,696,004 | + | yfhB | b2560 | 0.11 | +2.1 |
2,696,014 | + | yfhB | b2560 | 0.12 | +0.3 |
2,696,014 | + | yfhB | b2560 | 0.12 | +0.0 |
2,696,024 | + | yfhB | b2560 | 0.14 | -0.9 |
2,696,044 | + | yfhB | b2560 | 0.17 | -1.7 |
2,696,044 | - | yfhB | b2560 | 0.17 | -2.3 |
2,696,050 | - | yfhB | b2560 | 0.18 | +1.1 |
2,696,077 | - | yfhB | b2560 | 0.22 | -1.6 |
2,696,077 | - | yfhB | b2560 | 0.22 | -2.5 |
2,696,089 | + | yfhB | b2560 | 0.24 | -2.0 |
2,696,089 | + | yfhB | b2560 | 0.24 | +0.5 |
2,696,164 | - | yfhB | b2560 | 0.36 | -0.5 |
2,696,477 | + | yfhB | b2560 | 0.85 | +0.4 |
2,696,479 | + | yfhB | b2560 | 0.85 | +2.2 |
2,696,479 | + | yfhB | b2560 | 0.85 | -1.2 |
2,696,526 | + | +1.4 | |||
2,696,543 | - | -2.3 | |||
2,696,543 | - | +0.4 | |||
2,696,571 | + | +1.9 | |||
2,696,579 | - | +1.4 | |||
2,696,582 | - | -1.4 | |||
2,696,673 | - | -2.9 | |||
2,696,673 | - | +3.2 | |||
2,696,739 | + | -1.5 | |||
2,696,828 | + | +1.7 | |||
2,696,830 | + | -1.7 | |||
2,696,916 | - | yfhH | b2561 | 0.16 | -0.1 |
2,697,042 | - | yfhH | b2561 | 0.31 | -1.2 |
2,697,102 | + | yfhH | b2561 | 0.38 | +0.4 |
2,697,162 | + | yfhH | b2561 | 0.45 | -1.4 |
2,697,181 | + | yfhH | b2561 | 0.47 | +0.3 |
2,697,290 | + | yfhH | b2561 | 0.60 | +1.0 |
2,697,290 | + | yfhH | b2561 | 0.60 | -0.2 |
2,697,290 | + | yfhH | b2561 | 0.60 | -1.4 |
2,697,320 | - | yfhH | b2561 | 0.63 | +2.6 |
2,697,326 | + | yfhH | b2561 | 0.64 | -1.9 |
2,697,326 | + | yfhH | b2561 | 0.64 | -0.7 |
2,697,334 | - | yfhH | b2561 | 0.65 | +0.5 |
2,697,355 | + | yfhH | b2561 | 0.68 | -1.6 |
2,697,446 | + | yfhH | b2561 | 0.78 | +0.5 |
2,697,472 | - | yfhH | b2561 | 0.81 | +0.4 |
2,697,514 | + | yfhH | b2561 | 0.86 | -0.2 |
Or see this region's nucleotide sequence