Strain Fitness in Escherichia coli BW25113 around b2507
Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,627,996 | - | yfgH | b2505 | 0.35 | -1.5 |
2,628,036 | + | yfgH | b2505 | 0.43 | -2.3 |
2,628,056 | - | yfgH | b2505 | 0.47 | -0.2 |
2,628,058 | + | yfgH | b2505 | 0.47 | +1.1 |
2,628,060 | + | yfgH | b2505 | 0.47 | +1.5 |
2,628,067 | + | yfgH | b2505 | 0.49 | +2.0 |
2,628,068 | - | yfgH | b2505 | 0.49 | +0.1 |
2,628,109 | - | yfgH | b2505 | 0.57 | +0.8 |
2,628,109 | - | yfgH | b2505 | 0.57 | +1.4 |
2,628,114 | - | yfgH | b2505 | 0.58 | +1.6 |
2,628,126 | + | yfgH | b2505 | 0.60 | +1.9 |
2,628,145 | + | yfgH | b2505 | 0.64 | +1.6 |
2,628,178 | - | yfgH | b2505 | 0.70 | -0.1 |
2,628,196 | - | yfgH | b2505 | 0.74 | +1.7 |
2,628,202 | + | yfgH | b2505 | 0.75 | -0.5 |
2,628,210 | + | yfgH | b2505 | 0.76 | +0.5 |
2,628,210 | + | yfgH | b2505 | 0.76 | -0.2 |
2,628,212 | + | yfgH | b2505 | 0.77 | +1.0 |
2,628,217 | + | yfgH | b2505 | 0.78 | -0.6 |
2,628,225 | - | yfgH | b2505 | 0.79 | -0.4 |
2,628,227 | + | yfgH | b2505 | 0.80 | +2.1 |
2,628,230 | - | yfgH | b2505 | 0.80 | -0.7 |
2,628,255 | + | yfgH | b2505 | 0.85 | -0.1 |
2,628,267 | + | yfgH | b2505 | 0.87 | +0.4 |
2,628,316 | + | -0.2 | |||
2,628,316 | + | +1.4 | |||
2,628,381 | + | -0.2 | |||
2,628,381 | + | +0.0 | |||
2,628,562 | + | yfgI | b2506 | 0.40 | -2.0 |
2,628,675 | - | yfgI | b2506 | 0.61 | +1.6 |
2,628,763 | - | yfgI | b2506 | 0.77 | -1.5 |
2,628,788 | - | yfgI | b2506 | 0.81 | +1.4 |
2,628,788 | - | yfgI | b2506 | 0.81 | -0.6 |
2,628,938 | + | -1.0 | |||
2,628,972 | - | -0.5 | |||
2,630,612 | - | -0.6 |
Or see this region's nucleotide sequence