Strain Fitness in Escherichia coli BW25113 around b2477
Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.004 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,594,872 | - | +1.7 | |||
| 2,594,943 | - | +2.9 | |||
| 2,594,980 | + | -1.0 | |||
| 2,595,179 | - | -0.2 | |||
| 2,595,179 | - | purC | b2476 | 0.35 | +1.3 |
| 2,595,364 | - | purC | b2476 | 0.61 | +0.5 |
| 2,595,494 | + | purC | b2476 | 0.79 | -1.7 |
| 2,595,574 | + | -0.9 | |||
| 2,595,593 | + | -1.2 | |||
| 2,595,601 | - | +0.5 | |||
| 2,595,601 | - | -2.4 | |||
| 2,595,601 | - | +1.3 | |||
| 2,595,601 | - | +3.9 | |||
| 2,595,601 | - | +1.1 | |||
| 2,595,625 | - | +1.3 | |||
| 2,595,837 | + | -2.2 | |||
| 2,595,877 | - | +0.6 | |||
| 2,595,937 | + | -1.0 | |||
| 2,595,937 | + | +0.3 | |||
| 2,595,944 | - | -1.0 | |||
| 2,595,944 | - | +1.3 | |||
| 2,595,991 | + | nlpB | b2477 | 0.13 | -1.8 |
| 2,595,991 | + | nlpB | b2477 | 0.13 | -1.8 |
| 2,596,206 | + | nlpB | b2477 | 0.34 | -2.4 |
| 2,596,295 | - | nlpB | b2477 | 0.43 | -1.5 |
| 2,596,349 | - | nlpB | b2477 | 0.48 | -2.7 |
| 2,596,439 | - | nlpB | b2477 | 0.57 | -0.2 |
| 2,596,441 | + | nlpB | b2477 | 0.57 | -3.1 |
| 2,596,792 | + | -0.2 | |||
| 2,596,792 | + | +0.3 | |||
| 2,596,883 | - | -1.7 | |||
| 2,596,883 | - | -2.4 |
Or see this region's nucleotide sequence