Strain Fitness in Escherichia coli BW25113 around b2467
Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.004 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 2,580,163 | - | ypfG | b2466 | 0.39 | +2.1 |
| 2,580,219 | + | ypfG | b2466 | 0.44 | -0.6 |
| 2,580,222 | - | ypfG | b2466 | 0.45 | -0.3 |
| 2,580,222 | - | ypfG | b2466 | 0.45 | -1.0 |
| 2,580,223 | - | ypfG | b2466 | 0.45 | +0.7 |
| 2,580,258 | - | ypfG | b2466 | 0.48 | -2.4 |
| 2,580,264 | - | ypfG | b2466 | 0.49 | +0.1 |
| 2,580,517 | + | ypfG | b2466 | 0.73 | -1.3 |
| 2,580,572 | + | ypfG | b2466 | 0.78 | +0.4 |
| 2,580,609 | + | ypfG | b2466 | 0.82 | +1.0 |
| 2,580,609 | + | ypfG | b2466 | 0.82 | +0.3 |
| 2,580,959 | + | -2.3 | |||
| 2,580,959 | + | -1.7 | |||
| 2,581,059 | - | yffH | b2467 | 0.23 | +0.8 |
| 2,581,099 | - | yffH | b2467 | 0.30 | -2.0 |
| 2,581,124 | + | yffH | b2467 | 0.35 | +0.2 |
| 2,581,325 | + | yffH | b2467 | 0.69 | -0.4 |
| 2,581,335 | - | yffH | b2467 | 0.71 | +0.6 |
| 2,581,342 | + | yffH | b2467 | 0.72 | -2.4 |
| 2,581,350 | - | yffH | b2467 | 0.74 | -1.3 |
| 2,581,369 | - | +1.3 | |||
| 2,581,372 | + | yffH | b2467 | 0.78 | -0.2 |
| 2,581,380 | - | yffH | b2467 | 0.79 | +1.3 |
| 2,581,380 | - | yffH | b2467 | 0.79 | -0.3 |
| 2,581,445 | + | +0.4 | |||
| 2,581,453 | - | -0.4 | |||
| 2,581,453 | - | -0.9 | |||
| 2,581,570 | + | +2.7 | |||
| 2,581,570 | + | -1.5 | |||
| 2,581,662 | - | +0.9 | |||
| 2,581,712 | - | -1.0 | |||
| 2,581,718 | - | +0.5 | |||
| 2,581,718 | - | +0.7 | |||
| 2,581,759 | + | +1.0 | |||
| 2,582,128 | + | aegA | b2468 | 0.28 | +1.3 |
| 2,582,194 | + | aegA | b2468 | 0.32 | +0.2 |
| 2,582,250 | + | aegA | b2468 | 0.34 | +0.9 |
| 2,582,417 | - | aegA | b2468 | 0.43 | +1.2 |
| 2,582,417 | - | aegA | b2468 | 0.43 | +1.3 |
| 2,582,423 | - | aegA | b2468 | 0.43 | +1.0 |
| 2,582,423 | - | aegA | b2468 | 0.43 | -0.2 |
Or see this region's nucleotide sequence