Strain Fitness in Escherichia coli BW25113 around b2465
Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,576,853 | - | talA | b2464 | 0.17 | +0.4 |
2,576,984 | - | talA | b2464 | 0.31 | -1.8 |
2,577,042 | - | talA | b2464 | 0.37 | -0.0 |
2,577,044 | + | talA | b2464 | 0.37 | +1.0 |
2,577,044 | + | talA | b2464 | 0.37 | -1.0 |
2,577,060 | - | talA | b2464 | 0.39 | +2.9 |
2,577,060 | - | talA | b2464 | 0.39 | -0.5 |
2,577,263 | + | talA | b2464 | 0.60 | -1.8 |
2,577,266 | + | talA | b2464 | 0.61 | +1.6 |
2,577,491 | - | talA | b2464 | 0.84 | +0.0 |
2,577,659 | - | -2.1 | |||
2,577,696 | + | +1.6 | |||
2,577,704 | - | +1.3 | |||
2,577,706 | - | +1.6 | |||
2,577,706 | - | -1.0 | |||
2,577,856 | - | +0.1 | |||
2,577,856 | - | +0.0 | |||
2,578,022 | + | tktB | b2465 | 0.18 | +1.1 |
2,578,083 | - | tktB | b2465 | 0.21 | -1.3 |
2,578,083 | - | tktB | b2465 | 0.21 | -0.1 |
2,578,169 | + | tktB | b2465 | 0.25 | +2.0 |
2,578,352 | + | tktB | b2465 | 0.35 | -1.3 |
2,578,372 | + | tktB | b2465 | 0.36 | +0.5 |
2,578,439 | + | tktB | b2465 | 0.39 | -2.6 |
2,578,439 | + | tktB | b2465 | 0.39 | -1.4 |
2,578,624 | + | tktB | b2465 | 0.48 | -1.3 |
2,578,725 | + | tktB | b2465 | 0.53 | +0.7 |
2,578,725 | + | tktB | b2465 | 0.53 | +2.3 |
2,578,865 | + | tktB | b2465 | 0.60 | +0.0 |
2,579,050 | - | tktB | b2465 | 0.69 | -2.9 |
2,579,050 | - | tktB | b2465 | 0.69 | +0.3 |
2,579,050 | - | tktB | b2465 | 0.69 | -0.4 |
2,579,050 | - | tktB | b2465 | 0.69 | +0.1 |
2,579,079 | - | tktB | b2465 | 0.71 | +2.8 |
2,579,181 | + | tktB | b2465 | 0.76 | -2.3 |
2,579,205 | - | tktB | b2465 | 0.77 | -0.3 |
2,579,369 | + | tktB | b2465 | 0.85 | -1.7 |
2,579,406 | - | tktB | b2465 | 0.87 | -0.7 |
2,579,406 | - | tktB | b2465 | 0.87 | -2.4 |
2,579,438 | - | tktB | b2465 | 0.89 | +0.4 |
2,579,438 | - | tktB | b2465 | 0.89 | +0.4 |
2,579,586 | + | +1.5 | |||
2,579,702 | - | -1.3 | |||
2,579,799 | - | -0.7 | |||
2,579,799 | - | +0.3 | |||
2,579,825 | + | +1.3 | |||
2,579,825 | + | +0.7 | |||
2,580,163 | - | ypfG | b2466 | 0.39 | +2.1 |
2,580,219 | + | ypfG | b2466 | 0.44 | -0.6 |
2,580,222 | - | ypfG | b2466 | 0.45 | -0.3 |
2,580,222 | - | ypfG | b2466 | 0.45 | -1.0 |
2,580,223 | - | ypfG | b2466 | 0.45 | +0.7 |
2,580,258 | - | ypfG | b2466 | 0.48 | -2.4 |
2,580,264 | - | ypfG | b2466 | 0.49 | +0.1 |
2,580,517 | + | ypfG | b2466 | 0.73 | -1.3 |
2,580,572 | + | ypfG | b2466 | 0.78 | +0.4 |
2,580,609 | + | ypfG | b2466 | 0.82 | +1.0 |
2,580,609 | + | ypfG | b2466 | 0.82 | +0.3 |
Or see this region's nucleotide sequence