Strain Fitness in Escherichia coli BW25113 around b2459
Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,570,654 | - | eutI | b2458 | 0.14 | -1.1 |
2,570,989 | + | eutI | b2458 | 0.47 | -0.7 |
2,570,989 | + | eutI | b2458 | 0.47 | -0.4 |
2,571,039 | + | eutI | b2458 | 0.52 | +1.3 |
2,571,065 | - | eutI | b2458 | 0.54 | +2.3 |
2,571,148 | + | eutI | b2458 | 0.63 | -0.3 |
2,571,148 | + | eutI | b2458 | 0.63 | +1.1 |
2,571,330 | - | eutI | b2458 | 0.81 | +0.2 |
2,571,337 | - | eutI | b2458 | 0.81 | -0.7 |
2,571,337 | - | eutI | b2458 | 0.81 | +2.2 |
2,571,441 | + | -1.7 | |||
2,571,561 | + | +2.3 | |||
2,571,561 | + | +1.2 | |||
2,571,564 | - | -0.0 | |||
2,571,599 | + | -2.3 | |||
2,571,603 | - | +0.9 | |||
2,571,603 | - | +3.3 | |||
2,571,655 | + | eutT | b2459 | 0.16 | -0.3 |
2,571,812 | + | eutT | b2459 | 0.36 | +0.0 |
2,571,924 | + | eutT | b2459 | 0.50 | -1.0 |
2,571,924 | + | eutT | b2459 | 0.50 | -0.7 |
2,571,985 | - | eutT | b2459 | 0.57 | +0.5 |
2,571,985 | - | eutT | b2459 | 0.57 | +2.9 |
2,572,113 | + | eutT | b2459 | 0.73 | +0.8 |
2,572,134 | + | eutT | b2459 | 0.76 | +0.5 |
2,572,134 | + | eutT | b2459 | 0.76 | +1.1 |
2,572,153 | - | eutT | b2459 | 0.78 | +0.3 |
2,572,405 | + | eutQ | b2460 | 0.12 | +0.3 |
2,572,471 | - | eutQ | b2460 | 0.21 | -0.7 |
2,572,471 | - | eutQ | b2460 | 0.21 | -2.3 |
2,572,477 | + | eutQ | b2460 | 0.22 | -2.7 |
2,572,539 | + | eutQ | b2460 | 0.31 | -1.0 |
2,572,539 | + | eutQ | b2460 | 0.31 | -1.5 |
2,572,539 | + | eutQ | b2460 | 0.31 | +1.0 |
2,572,539 | + | eutQ | b2460 | 0.31 | +0.8 |
2,572,584 | - | eutQ | b2460 | 0.37 | +1.3 |
2,573,126 | + | eutP | b2461 | 0.26 | +0.5 |
2,573,186 | - | eutP | b2461 | 0.39 | +1.1 |
2,573,186 | - | eutP | b2461 | 0.39 | +2.3 |
2,573,222 | - | eutP | b2461 | 0.46 | -0.7 |
2,573,225 | + | eutP | b2461 | 0.47 | +2.3 |
2,573,225 | + | eutP | b2461 | 0.47 | +2.3 |
2,573,237 | - | eutP | b2461 | 0.49 | +0.7 |
2,573,260 | + | eutP | b2461 | 0.54 | -0.5 |
2,573,260 | + | eutP | b2461 | 0.54 | -2.5 |
2,573,278 | + | eutP | b2461 | 0.58 | -0.5 |
2,573,278 | + | eutP | b2461 | 0.58 | +0.7 |
2,573,279 | - | eutP | b2461 | 0.58 | +0.3 |
2,573,281 | + | eutP | b2461 | 0.59 | -0.3 |
2,573,281 | + | eutP | b2461 | 0.59 | -0.6 |
2,573,281 | + | eutP | b2461 | 0.59 | +2.6 |
2,573,281 | + | eutP | b2461 | 0.59 | -1.3 |
2,573,281 | + | eutP | b2461 | 0.59 | -2.4 |
2,573,281 | - | eutP | b2461 | 0.59 | +1.0 |
2,573,281 | - | eutP | b2461 | 0.59 | -1.0 |
2,573,282 | + | eutP | b2461 | 0.59 | +0.8 |
2,573,282 | + | eutP | b2461 | 0.59 | +0.1 |
2,573,283 | + | eutP | b2461 | 0.59 | -1.5 |
2,573,283 | + | eutP | b2461 | 0.59 | +0.6 |
2,573,283 | + | eutP | b2461 | 0.59 | -1.7 |
2,573,284 | - | eutP | b2461 | 0.59 | -2.7 |
2,573,286 | - | eutP | b2461 | 0.60 | +1.1 |
2,573,291 | - | eutP | b2461 | 0.61 | -0.4 |
2,573,291 | - | eutP | b2461 | 0.61 | -0.5 |
2,573,304 | + | eutP | b2461 | 0.63 | -0.8 |
2,573,304 | + | eutP | b2461 | 0.63 | +1.3 |
2,573,304 | + | eutP | b2461 | 0.63 | +1.7 |
2,573,312 | - | eutP | b2461 | 0.65 | -2.4 |
2,573,315 | + | eutP | b2461 | 0.66 | +1.4 |
Or see this region's nucleotide sequence