Strain Fitness in Escherichia coli BW25113 around b2224
Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,323,139 | + | atoE | b2223 | 0.27 | -1.0 |
2,323,194 | - | atoE | b2223 | 0.31 | -1.9 |
2,323,260 | + | atoE | b2223 | 0.36 | +0.5 |
2,323,321 | - | atoE | b2223 | 0.41 | +0.5 |
2,323,321 | - | atoE | b2223 | 0.41 | +0.7 |
2,323,403 | + | atoE | b2223 | 0.47 | +0.1 |
2,323,417 | - | atoE | b2223 | 0.48 | +1.3 |
2,323,417 | - | atoE | b2223 | 0.48 | +1.1 |
2,323,426 | - | atoE | b2223 | 0.49 | +0.4 |
2,323,475 | - | atoE | b2223 | 0.53 | +0.9 |
2,323,601 | + | atoE | b2223 | 0.62 | -1.9 |
2,323,601 | + | atoE | b2223 | 0.62 | +0.1 |
2,323,608 | + | atoE | b2223 | 0.63 | -0.7 |
2,323,873 | + | atoE | b2223 | 0.83 | +3.1 |
2,324,037 | + | +0.9 | |||
2,324,037 | + | +3.1 | |||
2,324,037 | + | +1.1 | |||
2,324,148 | + | +1.9 | |||
2,324,307 | - | atoB | b2224 | 0.15 | -0.6 |
2,324,469 | + | atoB | b2224 | 0.29 | +1.0 |
2,324,539 | - | atoB | b2224 | 0.34 | -0.1 |
2,324,547 | + | atoB | b2224 | 0.35 | -1.9 |
2,324,547 | + | atoB | b2224 | 0.35 | +1.0 |
2,324,549 | + | atoB | b2224 | 0.35 | -0.4 |
2,324,585 | - | atoB | b2224 | 0.38 | +0.6 |
2,324,735 | + | atoB | b2224 | 0.51 | -1.8 |
2,324,886 | - | atoB | b2224 | 0.64 | +1.3 |
2,325,002 | - | atoB | b2224 | 0.74 | +1.3 |
2,325,006 | - | atoB | b2224 | 0.74 | +1.1 |
2,325,077 | - | atoB | b2224 | 0.80 | +0.3 |
2,325,094 | + | atoB | b2224 | 0.81 | -0.0 |
2,325,215 | - | +0.7 | |||
2,325,222 | - | -0.9 | |||
2,325,224 | - | +3.3 | |||
2,325,224 | - | +1.1 | |||
2,325,226 | + | -2.0 | |||
2,325,354 | + | +1.6 | |||
2,325,354 | + | +0.8 | |||
2,325,393 | - | +1.2 | |||
2,325,393 | - | -0.9 | |||
2,325,488 | + | yfaP | b2225 | 0.13 | +1.0 |
2,325,526 | + | yfaP | b2225 | 0.18 | -1.2 |
2,325,537 | - | yfaP | b2225 | 0.19 | -0.1 |
2,325,555 | - | yfaP | b2225 | 0.21 | -1.9 |
2,325,623 | - | yfaP | b2225 | 0.30 | -0.9 |
2,325,623 | - | yfaP | b2225 | 0.30 | +0.4 |
2,325,656 | - | yfaP | b2225 | 0.34 | -0.2 |
2,325,756 | + | yfaP | b2225 | 0.47 | -1.0 |
2,325,759 | - | yfaP | b2225 | 0.48 | -0.4 |
2,325,970 | + | yfaP | b2225 | 0.75 | +1.5 |
2,325,970 | + | yfaP | b2225 | 0.75 | +0.1 |
2,326,112 | - | +0.6 | |||
2,326,112 | - | -0.6 | |||
2,326,209 | + | -0.4 | |||
2,326,209 | + | +1.1 | |||
2,326,237 | - | -1.4 | |||
2,326,286 | - | -0.1 |
Or see this region's nucleotide sequence