Strain Fitness in Escherichia coli BW25113 around b2183
Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,276,885 | - | bcr | b2182 | 0.25 | -0.2 |
2,276,892 | - | bcr | b2182 | 0.25 | +1.7 |
2,276,892 | - | bcr | b2182 | 0.25 | +1.1 |
2,276,950 | - | bcr | b2182 | 0.30 | -0.4 |
2,276,950 | - | bcr | b2182 | 0.30 | -0.4 |
2,277,132 | + | bcr | b2182 | 0.45 | +0.7 |
2,277,137 | + | bcr | b2182 | 0.46 | +1.7 |
2,277,197 | + | bcr | b2182 | 0.51 | +2.5 |
2,277,287 | + | bcr | b2182 | 0.58 | +0.7 |
2,277,287 | + | bcr | b2182 | 0.58 | -0.4 |
2,277,352 | - | bcr | b2182 | 0.64 | -2.0 |
2,277,352 | - | bcr | b2182 | 0.64 | +1.5 |
2,277,352 | - | bcr | b2182 | 0.64 | -1.2 |
2,277,422 | - | bcr | b2182 | 0.70 | -1.2 |
2,277,445 | + | bcr | b2182 | 0.72 | +1.4 |
2,277,573 | + | bcr | b2182 | 0.82 | -1.4 |
2,277,625 | - | bcr | b2182 | 0.87 | +0.9 |
2,277,628 | - | bcr | b2182 | 0.87 | -2.0 |
2,277,641 | + | bcr | b2182 | 0.88 | +0.4 |
2,277,695 | + | +1.4 | |||
2,277,695 | + | +0.9 | |||
2,277,696 | + | -0.6 | |||
2,277,759 | + | -1.3 | |||
2,277,767 | + | -0.7 | |||
2,278,002 | - | rsuA | b2183 | 0.28 | +0.4 |
2,278,018 | - | rsuA | b2183 | 0.30 | +1.7 |
2,278,126 | - | rsuA | b2183 | 0.45 | +0.1 |
2,278,173 | + | rsuA | b2183 | 0.52 | +0.3 |
2,278,266 | - | rsuA | b2183 | 0.66 | +1.6 |
2,278,285 | - | rsuA | b2183 | 0.68 | -1.2 |
2,278,462 | - | +0.7 | |||
2,278,560 | - | -0.3 | |||
2,278,678 | - | -2.4 | |||
2,278,720 | + | +1.1 | |||
2,278,720 | + | +0.1 | |||
2,278,785 | + | +1.5 | |||
2,278,785 | + | -1.2 | |||
2,278,824 | + | +1.1 | |||
2,278,824 | + | +2.0 | |||
2,278,834 | - | yejH | b2184 | 0.10 | -1.0 |
2,278,845 | + | yejH | b2184 | 0.11 | -0.7 |
2,278,897 | + | yejH | b2184 | 0.14 | +1.1 |
2,279,324 | - | yejH | b2184 | 0.38 | +0.1 |
2,279,324 | - | yejH | b2184 | 0.38 | +2.7 |
2,279,480 | + | yejH | b2184 | 0.47 | +1.9 |
Or see this region's nucleotide sequence