Strain Fitness in Escherichia coli BW25113 around b2046
Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,115,708 | + | wcaK | b2045 | 0.44 | -1.2 |
2,115,716 | - | wcaK | b2045 | 0.44 | +0.6 |
2,115,754 | - | wcaK | b2045 | 0.47 | +0.9 |
2,115,790 | + | wcaK | b2045 | 0.50 | +0.5 |
2,115,941 | + | wcaK | b2045 | 0.62 | -1.4 |
2,115,941 | + | wcaK | b2045 | 0.62 | -1.2 |
2,115,949 | - | wcaK | b2045 | 0.63 | +0.7 |
2,115,959 | - | wcaK | b2045 | 0.63 | -1.7 |
2,115,959 | - | wcaK | b2045 | 0.63 | -2.3 |
2,115,968 | + | wcaK | b2045 | 0.64 | -0.4 |
2,115,968 | + | wcaK | b2045 | 0.64 | +1.1 |
2,115,976 | - | wcaK | b2045 | 0.65 | +1.6 |
2,115,995 | + | wcaK | b2045 | 0.66 | -0.7 |
2,116,108 | + | wcaK | b2045 | 0.75 | -1.4 |
2,116,108 | + | wcaK | b2045 | 0.75 | -1.2 |
2,116,413 | + | +1.5 | |||
2,116,513 | - | -2.8 | |||
2,116,513 | - | -1.9 | |||
2,116,566 | - | +1.1 | |||
2,116,566 | - | -3.0 | |||
2,116,604 | - | -1.8 | |||
2,116,868 | + | wzxC | b2046 | 0.11 | +1.4 |
2,116,868 | + | wzxC | b2046 | 0.11 | -0.4 |
2,116,880 | + | wzxC | b2046 | 0.12 | -2.1 |
2,116,888 | - | wzxC | b2046 | 0.12 | -1.7 |
2,116,888 | - | wzxC | b2046 | 0.12 | -3.2 |
2,116,925 | + | wzxC | b2046 | 0.15 | +0.8 |
2,117,172 | - | wzxC | b2046 | 0.32 | -0.6 |
2,117,175 | + | wzxC | b2046 | 0.32 | +1.1 |
2,117,196 | - | wzxC | b2046 | 0.33 | +0.3 |
2,117,246 | + | wzxC | b2046 | 0.37 | -0.2 |
2,117,262 | - | wzxC | b2046 | 0.38 | -0.9 |
2,117,262 | - | wzxC | b2046 | 0.38 | -0.4 |
2,117,272 | + | wzxC | b2046 | 0.38 | +0.3 |
2,117,301 | + | wzxC | b2046 | 0.40 | +0.1 |
2,117,431 | + | wzxC | b2046 | 0.49 | -1.3 |
2,117,652 | - | wzxC | b2046 | 0.64 | -0.4 |
2,117,652 | - | wzxC | b2046 | 0.64 | -2.1 |
2,117,721 | + | wzxC | b2046 | 0.69 | -2.2 |
2,117,877 | + | wzxC | b2046 | 0.79 | +2.5 |
2,117,877 | + | wzxC | b2046 | 0.79 | -2.3 |
2,118,014 | - | wzxC | b2046 | 0.89 | -2.1 |
2,118,054 | - | -0.9 | |||
2,118,054 | - | -1.9 | |||
2,118,126 | - | -0.9 | |||
2,118,353 | + | wcaJ | b2047 | 0.12 | +1.0 |
2,118,353 | + | wcaJ | b2047 | 0.12 | +0.8 |
2,118,391 | - | wcaJ | b2047 | 0.15 | -2.4 |
2,118,476 | - | wcaJ | b2047 | 0.21 | -0.4 |
2,119,085 | - | wcaJ | b2047 | 0.65 | -1.2 |
2,119,106 | - | wcaJ | b2047 | 0.66 | +0.5 |
Or see this region's nucleotide sequence