Strain Fitness in Escherichia coli BW25113 around b1783
Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,864,037 | + | mipA | b1782 | 0.38 | -2.8 |
1,864,155 | + | mipA | b1782 | 0.54 | -0.5 |
1,864,155 | + | mipA | b1782 | 0.54 | -2.5 |
1,864,158 | - | mipA | b1782 | 0.55 | -2.1 |
1,864,158 | - | mipA | b1782 | 0.55 | +0.1 |
1,864,234 | - | mipA | b1782 | 0.65 | -0.3 |
1,864,234 | - | mipA | b1782 | 0.65 | -1.9 |
1,864,352 | - | mipA | b1782 | 0.81 | -2.4 |
1,864,398 | + | mipA | b1782 | 0.87 | -2.6 |
1,864,398 | + | mipA | b1782 | 0.87 | -2.7 |
1,864,659 | + | -1.5 | |||
1,864,659 | + | -2.7 | |||
1,864,832 | - | +0.3 | |||
1,865,039 | - | +0.2 | |||
1,865,039 | - | -2.5 | |||
1,865,044 | - | -0.8 | |||
1,865,184 | + | yeaG | b1783 | 0.13 | -2.3 |
1,865,184 | + | yeaG | b1783 | 0.13 | -2.3 |
1,865,225 | - | yeaG | b1783 | 0.15 | -2.6 |
1,865,500 | + | yeaG | b1783 | 0.29 | +0.5 |
1,865,528 | - | yeaG | b1783 | 0.31 | -2.8 |
1,865,594 | - | yeaG | b1783 | 0.34 | -0.0 |
1,865,788 | + | yeaG | b1783 | 0.44 | +1.1 |
1,865,889 | + | yeaG | b1783 | 0.49 | +0.1 |
1,866,001 | + | yeaG | b1783 | 0.55 | +0.1 |
1,866,009 | - | yeaG | b1783 | 0.56 | -1.8 |
1,866,158 | + | yeaG | b1783 | 0.63 | -0.7 |
1,866,158 | + | yeaG | b1783 | 0.63 | +0.5 |
1,866,313 | - | yeaG | b1783 | 0.71 | -1.8 |
1,866,545 | - | yeaG | b1783 | 0.83 | -0.5 |
1,866,658 | + | yeaG | b1783 | 0.89 | +0.6 |
1,866,698 | + | -0.5 | |||
1,866,698 | + | +2.1 | |||
1,866,706 | - | +0.1 | |||
1,866,877 | - | +1.0 | |||
1,866,880 | + | +0.2 | |||
1,866,928 | - | +0.1 | |||
1,866,928 | - | -0.8 | |||
1,867,119 | - | yeaH | b1784 | 0.11 | +1.0 |
1,867,362 | - | yeaH | b1784 | 0.30 | +2.1 |
1,867,362 | - | yeaH | b1784 | 0.30 | -0.6 |
1,867,578 | + | yeaH | b1784 | 0.47 | -0.1 |
1,867,578 | + | yeaH | b1784 | 0.47 | +1.1 |
1,867,694 | + | yeaH | b1784 | 0.56 | -0.3 |
1,867,723 | + | yeaH | b1784 | 0.58 | -0.5 |
1,867,772 | - | yeaH | b1784 | 0.62 | +0.4 |
1,867,803 | + | yeaH | b1784 | 0.64 | +1.0 |
1,867,803 | + | yeaH | b1784 | 0.64 | +1.6 |
1,867,843 | + | yeaH | b1784 | 0.67 | +2.3 |
Or see this region's nucleotide sequence