Strain Fitness in Escherichia coli BW25113 around b1635
Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,711,402 | + | tppB | b1634 | 0.41 | -0.6 |
1,711,402 | + | tppB | b1634 | 0.41 | -2.2 |
1,711,536 | + | tppB | b1634 | 0.49 | -0.6 |
1,711,536 | + | tppB | b1634 | 0.49 | -1.6 |
1,711,582 | - | tppB | b1634 | 0.52 | -1.0 |
1,711,803 | - | tppB | b1634 | 0.67 | +0.6 |
1,711,932 | - | tppB | b1634 | 0.76 | -1.6 |
1,711,978 | - | tppB | b1634 | 0.79 | -0.6 |
1,712,070 | - | tppB | b1634 | 0.85 | -2.7 |
1,712,104 | - | tppB | b1634 | 0.87 | -1.6 |
1,712,104 | - | tppB | b1634 | 0.87 | -1.0 |
1,712,109 | + | tppB | b1634 | 0.88 | -1.0 |
1,712,543 | - | gst | b1635 | 0.23 | +0.9 |
1,712,623 | - | gst | b1635 | 0.37 | -2.0 |
1,712,715 | + | gst | b1635 | 0.52 | +1.0 |
1,713,214 | + | pdxY | b1636 | 0.19 | +2.5 |
1,713,223 | + | pdxY | b1636 | 0.20 | +1.3 |
1,713,223 | + | pdxY | b1636 | 0.20 | -2.4 |
1,713,223 | + | pdxY | b1636 | 0.20 | +1.5 |
1,713,352 | - | pdxY | b1636 | 0.35 | +2.0 |
1,713,469 | + | pdxY | b1636 | 0.48 | -1.0 |
1,713,546 | - | pdxY | b1636 | 0.57 | -3.0 |
1,713,571 | + | pdxY | b1636 | 0.60 | -1.3 |
1,713,571 | + | pdxY | b1636 | 0.60 | +1.0 |
1,713,624 | - | pdxY | b1636 | 0.66 | +1.2 |
1,713,889 | + | +1.0 | |||
1,713,889 | + | -0.0 | |||
1,713,913 | + | -0.3 | |||
1,713,913 | + | +1.6 |
Or see this region's nucleotide sequence