Strain Fitness in Escherichia coli BW25113 around b1333
Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,395,516 | - | ynaJ | b1332 | 0.49 | +0.4 |
1,395,618 | - | ynaJ | b1332 | 0.89 | -1.5 |
1,395,682 | + | -1.9 | |||
1,395,748 | - | -0.3 | |||
1,396,148 | + | uspE | b1333 | 0.48 | -1.2 |
1,396,214 | - | uspE | b1333 | 0.54 | +1.3 |
1,396,295 | - | uspE | b1333 | 0.63 | +1.0 |
1,396,341 | + | uspE | b1333 | 0.68 | +0.6 |
1,396,604 | + | +0.3 | |||
1,396,609 | + | +1.4 | |||
1,396,609 | + | +2.0 | |||
1,396,728 | - | +4.1 | |||
1,396,728 | - | -0.6 | |||
1,397,086 | + | fnr | b1334 | 0.38 | -0.5 |
1,397,086 | + | fnr | b1334 | 0.38 | +0.7 |
1,397,125 | - | fnr | b1334 | 0.43 | +0.1 |
1,397,125 | - | fnr | b1334 | 0.43 | +1.1 |
1,397,287 | - | fnr | b1334 | 0.65 | +0.1 |
1,397,605 | + | +0.8 | |||
1,397,605 | + | +0.9 |
Or see this region's nucleotide sequence