Strain Fitness in Escherichia coli BW25113 around b1248
Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,303,902 | + | oppF | b1247 | 0.11 | -0.1 |
1,303,914 | - | oppF | b1247 | 0.13 | -0.4 |
1,303,981 | + | oppF | b1247 | 0.19 | -1.8 |
1,303,981 | + | oppF | b1247 | 0.19 | -0.8 |
1,304,158 | + | oppF | b1247 | 0.37 | +1.8 |
1,304,294 | + | oppF | b1247 | 0.50 | +0.4 |
1,304,294 | + | oppF | b1247 | 0.50 | -2.1 |
1,304,367 | + | oppF | b1247 | 0.58 | +0.2 |
1,304,720 | + | +0.4 | |||
1,304,780 | - | -1.6 | |||
1,304,780 | - | -1.6 | |||
1,305,078 | - | b1248 | b1248 | 0.71 | +2.0 |
1,305,078 | - | b1248 | b1248 | 0.71 | -2.0 |
1,305,176 | + | -0.8 | |||
1,305,186 | + | +0.3 | |||
1,305,539 | + | cls | b1249 | 0.23 | -1.4 |
1,305,539 | + | cls | b1249 | 0.23 | -0.6 |
1,305,576 | - | cls | b1249 | 0.25 | -0.4 |
1,305,588 | - | cls | b1249 | 0.26 | -2.8 |
1,305,588 | - | cls | b1249 | 0.26 | +0.2 |
1,305,625 | - | cls | b1249 | 0.28 | -2.6 |
1,305,641 | + | cls | b1249 | 0.30 | -0.4 |
1,305,641 | + | cls | b1249 | 0.30 | -1.6 |
1,305,899 | + | cls | b1249 | 0.47 | -2.3 |
1,305,959 | + | cls | b1249 | 0.51 | -0.8 |
1,306,053 | - | cls | b1249 | 0.58 | -2.3 |
1,306,071 | - | cls | b1249 | 0.59 | +0.2 |
Or see this region's nucleotide sequence