Strain Fitness in Escherichia coli BW25113 around b1223
Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,276,194 | - | narX | b1222 | 0.64 | +1.2 |
1,276,194 | - | narX | b1222 | 0.64 | +0.7 |
1,276,540 | + | narX | b1222 | 0.83 | +2.4 |
1,276,550 | - | narX | b1222 | 0.84 | +3.0 |
1,276,664 | + | -1.0 | |||
1,276,664 | + | +0.2 | |||
1,276,711 | - | +1.4 | |||
1,276,756 | - | +0.8 | |||
1,276,825 | - | +4.4 | |||
1,276,915 | + | +1.6 | |||
1,277,137 | - | +2.0 | |||
1,277,162 | - | -1.2 | |||
1,277,162 | - | +1.2 | |||
1,277,166 | + | +1.9 | |||
1,277,184 | - | -1.4 | |||
1,277,196 | - | -0.0 | |||
1,277,688 | + | narK | b1223 | 0.36 | +1.5 |
1,277,765 | + | narK | b1223 | 0.42 | -1.2 |
1,277,799 | + | narK | b1223 | 0.44 | +1.3 |
1,277,942 | + | narK | b1223 | 0.55 | +1.6 |
1,277,942 | + | narK | b1223 | 0.55 | +1.2 |
1,278,017 | - | narK | b1223 | 0.60 | +1.0 |
1,278,184 | + | narK | b1223 | 0.72 | +0.7 |
1,278,305 | - | narK | b1223 | 0.81 | +2.5 |
1,278,309 | + | narK | b1223 | 0.81 | +1.2 |
1,278,535 | + | +1.0 | |||
1,278,535 | + | +0.2 | |||
1,278,545 | + | -0.8 | |||
1,278,545 | + | -0.8 | |||
1,278,545 | + | -1.6 | |||
1,278,545 | + | -2.4 | |||
1,278,593 | + | +1.2 | |||
1,278,646 | + | -1.2 | |||
1,278,648 | + | +1.2 | |||
1,278,648 | + | -0.4 | |||
1,278,674 | + | -1.4 | |||
1,278,674 | + | -0.6 | |||
1,278,686 | + | +0.5 | |||
1,278,686 | + | -1.3 | |||
1,278,817 | - | +0.5 | |||
1,278,845 | - | +2.5 | |||
1,278,947 | - | -0.3 | |||
1,279,014 | + | +0.2 | |||
1,279,014 | + | -0.8 | |||
1,279,022 | - | +1.0 | |||
1,279,032 | + | +0.2 | |||
1,279,032 | + | +2.4 | |||
1,279,059 | + | +1.2 | |||
1,279,169 | - | +1.7 | |||
1,279,194 | + | +1.0 | |||
1,279,373 | + | -1.4 | |||
1,279,502 | - | narG | b1224 | 0.11 | -1.2 |
Or see this region's nucleotide sequence