Strain Fitness in Escherichia coli BW25113 around b0811
Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
845,547 | - | glnQ | b0809 | 0.81 | +0.7 |
845,569 | + | glnQ | b0809 | 0.84 | +0.7 |
845,596 | - | glnQ | b0809 | 0.87 | +2.0 |
845,596 | - | glnQ | b0809 | 0.87 | -0.3 |
845,994 | + | glnP | b0810 | 0.47 | +0.1 |
845,994 | + | glnP | b0810 | 0.47 | +1.9 |
845,997 | - | glnP | b0810 | 0.48 | -0.3 |
845,998 | + | glnP | b0810 | 0.48 | +1.6 |
845,998 | + | glnP | b0810 | 0.48 | -0.4 |
846,069 | + | glnP | b0810 | 0.58 | +2.1 |
846,069 | + | glnP | b0810 | 0.58 | -0.3 |
846,069 | + | glnP | b0810 | 0.58 | +0.2 |
846,085 | + | glnP | b0810 | 0.61 | +0.9 |
846,154 | - | glnP | b0810 | 0.71 | +1.4 |
846,209 | - | glnP | b0810 | 0.80 | +1.9 |
846,326 | + | +1.2 | |||
846,326 | + | +1.2 | |||
846,420 | + | +0.1 | |||
846,420 | + | -1.0 | |||
846,434 | + | +0.3 | |||
846,434 | + | -0.3 | |||
846,502 | - | -3.2 | |||
846,583 | + | glnH | b0811 | 0.14 | +3.3 |
846,583 | + | glnH | b0811 | 0.14 | +0.3 |
846,604 | + | glnH | b0811 | 0.16 | +0.6 |
846,658 | - | glnH | b0811 | 0.24 | +1.9 |
846,694 | + | glnH | b0811 | 0.29 | +0.6 |
846,727 | - | glnH | b0811 | 0.33 | +0.8 |
846,729 | + | glnH | b0811 | 0.33 | +2.8 |
846,731 | + | glnH | b0811 | 0.33 | +1.0 |
846,734 | - | glnH | b0811 | 0.34 | +0.6 |
846,745 | - | glnH | b0811 | 0.35 | +1.6 |
846,745 | - | glnH | b0811 | 0.35 | +1.3 |
846,812 | - | glnH | b0811 | 0.44 | -1.7 |
846,817 | + | glnH | b0811 | 0.45 | +1.7 |
846,817 | + | glnH | b0811 | 0.45 | -0.4 |
847,125 | + | glnH | b0811 | 0.86 | +1.0 |
847,125 | + | glnH | b0811 | 0.86 | +0.9 |
847,218 | - | -0.3 | |||
847,218 | - | -0.3 | |||
847,222 | + | +0.7 | |||
847,413 | + | +1.0 | |||
847,599 | + | +2.1 | |||
847,608 | + | -1.0 | |||
847,608 | + | +0.7 | |||
847,766 | - | dps | b0812 | 0.27 | +0.5 |
847,861 | + | dps | b0812 | 0.46 | -0.4 |
847,887 | - | dps | b0812 | 0.51 | -0.3 |
847,918 | - | dps | b0812 | 0.57 | -0.3 |
847,970 | + | dps | b0812 | 0.67 | -2.3 |
848,006 | - | dps | b0812 | 0.74 | -1.9 |
848,009 | - | dps | b0812 | 0.75 | -1.5 |
848,009 | - | dps | b0812 | 0.75 | +1.4 |
848,033 | + | dps | b0812 | 0.80 | +1.1 |
848,041 | + | dps | b0812 | 0.81 | +1.0 |
848,041 | + | dps | b0812 | 0.81 | -0.3 |
848,066 | + | dps | b0812 | 0.86 | +0.7 |
848,072 | - | dps | b0812 | 0.88 | +0.6 |
848,074 | - | dps | b0812 | 0.88 | -2.6 |
848,076 | + | dps | b0812 | 0.88 | +1.5 |
848,182 | + | +1.3 | |||
848,192 | + | -0.7 | |||
848,207 | - | -1.9 | |||
848,207 | - | -0.5 | |||
848,208 | + | +1.5 | |||
848,208 | + | -0.9 | |||
848,208 | + | +1.6 | |||
848,208 | + | -0.3 | |||
848,216 | - | +2.1 | |||
848,216 | - | -0.3 | |||
848,216 | - | -1.9 | |||
848,216 | - | -0.0 | |||
848,221 | + | +0.7 | |||
848,227 | + | -0.7 |
Or see this region's nucleotide sequence