Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ybiO and glnQ are separated by 260 nucleotides glnQ and glnP overlap by 4 nucleotides glnP and glnH are separated by 138 nucleotides
b0808: ybiO - putative transport protein (VIMSS), at 842,478 to 844,703
ybiO
b0809: glnQ - glutamine ABC transporter ATP-binding protein (NCBI), at 844,964 to 845,686
glnQ
b0810: glnP - glutamine ABC transporter permease protein (NCBI), at 845,683 to 846,342
glnP
b0811: glnH - glutamine ABC transporter periplasmic protein (NCBI), at 846,481 to 847,227
glnH
Position (kb)
845
846
847 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 844.694 kb on - strand at 844.712 kb on - strand at 845.109 kb on + strand, within glnQ at 845.154 kb on + strand, within glnQ at 845.243 kb on + strand, within glnQ at 845.243 kb on + strand, within glnQ at 845.288 kb on + strand, within glnQ at 845.547 kb on - strand, within glnQ at 845.569 kb on + strand, within glnQ at 845.596 kb on - strand, within glnQ at 845.596 kb on - strand, within glnQ at 845.994 kb on + strand, within glnP at 845.994 kb on + strand, within glnP at 845.997 kb on - strand, within glnP at 845.998 kb on + strand, within glnP at 845.998 kb on + strand, within glnP at 846.069 kb on + strand, within glnP at 846.069 kb on + strand, within glnP at 846.069 kb on + strand, within glnP at 846.085 kb on + strand, within glnP at 846.154 kb on - strand, within glnP at 846.209 kb on - strand, within glnP at 846.326 kb on + strand at 846.326 kb on + strand at 846.420 kb on + strand at 846.420 kb on + strand at 846.434 kb on + strand at 846.434 kb on + strand at 846.502 kb on - strand at 846.583 kb on + strand, within glnH at 846.583 kb on + strand, within glnH at 846.604 kb on + strand, within glnH at 846.658 kb on - strand, within glnH at 846.694 kb on + strand, within glnH at 846.727 kb on - strand, within glnH at 846.729 kb on + strand, within glnH at 846.731 kb on + strand, within glnH at 846.734 kb on - strand, within glnH at 846.745 kb on - strand, within glnH at 846.745 kb on - strand, within glnH at 846.812 kb on - strand, within glnH at 846.817 kb on + strand, within glnH at 846.817 kb on + strand, within glnH at 847.125 kb on + strand, within glnH at 847.125 kb on + strand, within glnH at 847.218 kb on - strand at 847.218 kb on - strand at 847.222 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Benzalkonium Chloride 0.004 mg/ml remove 844,694 - -0.3 844,712 - +2.7 845,109 + glnQ b0809 0.20 +1.5 845,154 + glnQ b0809 0.26 +1.9 845,243 + glnQ b0809 0.39 +1.6 845,243 + glnQ b0809 0.39 +2.1 845,288 + glnQ b0809 0.45 -0.2 845,547 - glnQ b0809 0.81 +0.7 845,569 + glnQ b0809 0.84 +0.7 845,596 - glnQ b0809 0.87 +2.0 845,596 - glnQ b0809 0.87 -0.3 845,994 + glnP b0810 0.47 +0.1 845,994 + glnP b0810 0.47 +1.9 845,997 - glnP b0810 0.48 -0.3 845,998 + glnP b0810 0.48 +1.6 845,998 + glnP b0810 0.48 -0.4 846,069 + glnP b0810 0.58 +2.1 846,069 + glnP b0810 0.58 -0.3 846,069 + glnP b0810 0.58 +0.2 846,085 + glnP b0810 0.61 +0.9 846,154 - glnP b0810 0.71 +1.4 846,209 - glnP b0810 0.80 +1.9 846,326 + +1.2 846,326 + +1.2 846,420 + +0.1 846,420 + -1.0 846,434 + +0.3 846,434 + -0.3 846,502 - -3.2 846,583 + glnH b0811 0.14 +3.3 846,583 + glnH b0811 0.14 +0.3 846,604 + glnH b0811 0.16 +0.6 846,658 - glnH b0811 0.24 +1.9 846,694 + glnH b0811 0.29 +0.6 846,727 - glnH b0811 0.33 +0.8 846,729 + glnH b0811 0.33 +2.8 846,731 + glnH b0811 0.33 +1.0 846,734 - glnH b0811 0.34 +0.6 846,745 - glnH b0811 0.35 +1.6 846,745 - glnH b0811 0.35 +1.3 846,812 - glnH b0811 0.44 -1.7 846,817 + glnH b0811 0.45 +1.7 846,817 + glnH b0811 0.45 -0.4 847,125 + glnH b0811 0.86 +1.0 847,125 + glnH b0811 0.86 +0.9 847,218 - -0.3 847,218 - -0.3 847,222 + +0.7
Or see this region's nucleotide sequence