Strain Fitness in Escherichia coli BW25113 around b0715
Experiment: Benzalkonium Chloride 0.004 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Benzalkonium Chloride 0.004 mg/ml |
---|---|---|---|---|---|
remove | |||||
744,978 | - | ybgL | b0713 | 0.80 | +0.4 |
744,978 | - | ybgL | b0713 | 0.80 | +1.1 |
745,140 | - | +1.3 | |||
745,148 | + | +2.8 | |||
745,194 | + | +2.3 | |||
745,194 | + | -1.2 | |||
745,286 | + | nei | b0714 | 0.16 | -1.0 |
745,297 | + | nei | b0714 | 0.18 | +2.2 |
745,297 | + | nei | b0714 | 0.18 | +1.5 |
745,358 | - | nei | b0714 | 0.25 | +1.8 |
745,358 | - | nei | b0714 | 0.25 | +3.5 |
745,419 | + | nei | b0714 | 0.33 | +0.5 |
745,689 | - | nei | b0714 | 0.67 | -0.2 |
745,991 | + | -1.2 | |||
746,028 | - | +0.5 | |||
746,035 | - | +0.3 | |||
746,088 | + | abrB | b0715 | 0.14 | +0.9 |
746,122 | - | abrB | b0715 | 0.17 | -1.1 |
746,218 | - | abrB | b0715 | 0.26 | +0.0 |
746,267 | - | abrB | b0715 | 0.31 | +1.5 |
746,335 | - | abrB | b0715 | 0.37 | -0.2 |
746,335 | - | abrB | b0715 | 0.37 | -0.8 |
746,412 | - | abrB | b0715 | 0.45 | -1.5 |
746,422 | - | abrB | b0715 | 0.45 | +1.1 |
746,509 | + | abrB | b0715 | 0.54 | +1.6 |
746,651 | - | abrB | b0715 | 0.67 | +1.3 |
746,768 | + | abrB | b0715 | 0.79 | -0.2 |
746,768 | + | abrB | b0715 | 0.79 | +1.8 |
746,815 | - | abrB | b0715 | 0.83 | +2.9 |
746,869 | + | abrB | b0715 | 0.88 | -2.6 |
746,929 | - | -1.0 | |||
747,003 | - | -0.2 | |||
747,003 | - | +0.3 | |||
747,024 | + | -0.2 | |||
747,027 | + | +2.0 | |||
747,042 | - | +2.3 | |||
747,172 | + | -1.7 | |||
747,172 | + | -1.8 | |||
747,251 | + | ybgO | b0716 | 0.10 | -1.7 |
747,251 | + | ybgO | b0716 | 0.10 | +0.1 |
747,255 | - | ybgO | b0716 | 0.10 | -0.2 |
747,255 | - | ybgO | b0716 | 0.10 | +0.2 |
747,303 | - | ybgO | b0716 | 0.15 | +1.9 |
747,329 | + | ybgO | b0716 | 0.17 | -0.4 |
747,346 | + | ybgO | b0716 | 0.19 | +1.2 |
747,363 | - | ybgO | b0716 | 0.21 | -0.2 |
747,363 | - | ybgO | b0716 | 0.21 | -2.1 |
747,372 | - | ybgO | b0716 | 0.21 | -0.4 |
747,372 | - | ybgO | b0716 | 0.21 | +0.3 |
747,382 | - | ybgO | b0716 | 0.22 | +1.6 |
747,382 | - | ybgO | b0716 | 0.22 | -1.7 |
747,393 | + | ybgO | b0716 | 0.23 | +1.7 |
747,393 | - | ybgO | b0716 | 0.23 | +1.8 |
747,393 | - | ybgO | b0716 | 0.23 | -1.7 |
747,393 | - | ybgO | b0716 | 0.23 | -1.0 |
747,435 | + | ybgO | b0716 | 0.27 | -1.2 |
747,438 | - | ybgO | b0716 | 0.28 | -2.2 |
747,438 | - | ybgO | b0716 | 0.28 | +2.0 |
747,446 | + | ybgO | b0716 | 0.28 | -1.7 |
747,446 | + | ybgO | b0716 | 0.28 | +0.0 |
747,470 | - | ybgO | b0716 | 0.31 | -1.8 |
747,470 | - | ybgO | b0716 | 0.31 | -0.7 |
747,554 | + | ybgO | b0716 | 0.39 | -1.1 |
747,583 | + | ybgO | b0716 | 0.41 | -1.5 |
747,583 | + | ybgO | b0716 | 0.41 | +1.3 |
747,618 | - | ybgO | b0716 | 0.45 | +1.9 |
747,618 | - | ybgO | b0716 | 0.45 | +1.3 |
747,619 | + | ybgO | b0716 | 0.45 | +1.3 |
747,716 | + | ybgO | b0716 | 0.54 | +0.4 |
747,724 | - | ybgO | b0716 | 0.55 | +0.1 |
747,724 | - | ybgO | b0716 | 0.55 | +0.1 |
747,760 | + | ybgO | b0716 | 0.58 | +0.7 |
747,760 | + | ybgO | b0716 | 0.58 | +0.1 |
747,804 | - | ybgO | b0716 | 0.62 | -1.2 |
747,806 | + | ybgO | b0716 | 0.62 | +0.7 |
747,814 | - | ybgO | b0716 | 0.63 | +2.3 |
747,819 | - | ybgO | b0716 | 0.64 | -0.7 |
747,819 | - | ybgO | b0716 | 0.64 | +3.5 |
747,824 | - | ybgO | b0716 | 0.64 | +0.7 |
747,837 | + | ybgO | b0716 | 0.65 | -0.7 |
747,838 | + | ybgO | b0716 | 0.65 | +2.3 |
747,838 | + | ybgO | b0716 | 0.65 | -0.2 |
747,841 | + | ybgO | b0716 | 0.66 | -0.2 |
747,846 | - | ybgO | b0716 | 0.66 | +0.9 |
747,897 | + | ybgO | b0716 | 0.71 | -1.7 |
747,897 | + | +2.3 | |||
747,957 | + | ybgO | b0716 | 0.77 | -0.5 |
747,957 | + | ybgO | b0716 | 0.77 | +0.1 |
747,957 | + | ybgO | b0716 | 0.77 | -1.0 |
747,958 | + | ybgO | b0716 | 0.77 | +0.0 |
747,960 | - | ybgO | b0716 | 0.77 | +0.3 |
Or see this region's nucleotide sequence