Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4141

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
4,958,293	+		Echvi_4139	0.35	-0.1
4,958,316	+		Echvi_4139	0.40	+0.3
4,958,316	+		Echvi_4139	0.40	-0.7
4,958,316	+		Echvi_4139	0.40	-1.4
4,958,317	-		Echvi_4139	0.41	-0.4
4,958,317	-		Echvi_4139	0.41	-2.3
4,958,324	+		Echvi_4139	0.42	+0.5
4,958,324	+		Echvi_4139	0.42	-0.4
4,958,325	-		Echvi_4139	0.43	+0.1
4,958,348	-		Echvi_4139	0.48	-0.2
4,958,353	+		Echvi_4139	0.50	-0.5
4,958,384	+		Echvi_4139	0.57	-0.2
4,958,385	-		Echvi_4139	0.58	+0.7
4,958,385	-		Echvi_4139	0.58	+0.5
4,958,385	-		Echvi_4139	0.58	-0.1
4,958,388	+		Echvi_4139	0.58	-0.3
4,958,389	-		Echvi_4139	0.59	+0.1
4,958,389	-		Echvi_4139	0.59	-0.4
4,958,389	-		Echvi_4139	0.59	+0.2
4,958,389	-		Echvi_4139	0.59	-2.1
4,958,392	+		Echvi_4139	0.59	+0.3
4,958,392	+		Echvi_4139	0.59	+0.1
4,958,392	+		Echvi_4139	0.59	-1.1
4,958,393	-		Echvi_4139	0.60	+0.3
4,958,456	-		Echvi_4139	0.75	+0.6
4,958,490	+		Echvi_4139	0.83	-0.4
4,958,490	+		Echvi_4139	0.83	+0.6
4,958,490	+		Echvi_4139	0.83	+0.7
4,958,491	-		Echvi_4139	0.84	+1.3
4,958,495	-		Echvi_4139	0.85	+1.0
4,958,515	+		Echvi_4139	0.90	+0.3
4,958,516	-				+1.0
4,958,536	+				-0.1
4,958,536	+				+0.4
4,958,537	-				-0.4
4,958,537	-				-1.1
4,958,560	+				+0.2
4,958,560	+				-1.1
4,958,560	+				+0.3
4,958,580	+				-0.2
4,958,580	+				+0.4
4,958,581	-				-0.6
4,958,583	+				-1.1
4,958,617	+				-1.3
4,958,644	+		Echvi_4140	0.16	+0.2
4,958,663	+		Echvi_4140	0.21	+1.3
4,958,664	-		Echvi_4140	0.22	-0.4
4,958,669	-		Echvi_4140	0.23	+0.5
4,958,685	-		Echvi_4140	0.28	-0.4
4,958,725	+		Echvi_4140	0.39	+0.9
4,958,725	+		Echvi_4140	0.39	+0.3
4,958,725	+		Echvi_4140	0.39	+0.4
4,958,746	+		Echvi_4140	0.45	+0.5
4,958,746	+		Echvi_4140	0.45	+1.2
4,958,747	-		Echvi_4140	0.45	-1.4
4,958,747	-		Echvi_4140	0.45	-0.5
4,958,750	-		Echvi_4140	0.46	-2.2
4,958,750	-				+1.7
4,958,750	-		Echvi_4140	0.46	+1.0
4,958,750	-		Echvi_4140	0.46	-1.2
4,958,750	-		Echvi_4140	0.46	+0.1
4,958,792	+		Echvi_4140	0.58	+0.8
4,958,812	+		Echvi_4140	0.64	+0.6
4,958,891	+		Echvi_4140	0.86	-0.3
4,958,911	+				+0.0
4,959,056	-				-0.7
4,959,088	-				-0.3
4,959,092	+				+0.5
4,959,092	+				-0.2
4,959,112	+				-0.3
4,959,113	-				-0.2
4,959,137	-				+0.9
4,959,137	-				-1.6
4,959,191	-				-0.7
4,959,222	+				+0.6
4,959,229	+				+0.7
4,959,232	+				-0.5
4,959,233	-				+0.3
4,959,234	+				+0.1
4,959,234	+				-0.2
4,959,270	+				+1.7
4,959,270	+				+0.1
4,959,300	+		Echvi_4141	0.16	+0.3
4,959,300	+		Echvi_4141	0.16	+1.3
4,959,300	+		Echvi_4141	0.16	+0.8
4,959,301	-		Echvi_4141	0.17	-1.0
4,959,382	+		Echvi_4141	0.55	-1.6
4,959,382	+		Echvi_4141	0.55	+0.8
4,959,393	+		Echvi_4141	0.60	+1.7
4,959,408	+		Echvi_4141	0.68	+0.0
4,959,411	+		Echvi_4141	0.69	-0.3
4,959,412	-		Echvi_4141	0.70	+0.3
4,959,412	-		Echvi_4141	0.70	+0.2
4,959,421	-		Echvi_4141	0.74	+0.1
4,959,431	+		Echvi_4141	0.79	-0.2
4,959,431	+		Echvi_4141	0.79	-1.0
4,959,433	+		Echvi_4141	0.80	+0.1
4,959,433	+		Echvi_4141	0.80	-0.1
4,959,433	+		Echvi_4141	0.80	-1.2
4,959,434	-		Echvi_4141	0.80	+0.6
4,959,434	-		Echvi_4141	0.80	-0.2
4,959,434	-		Echvi_4141	0.80	+0.2
4,959,434	-		Echvi_4141	0.80	-0.8
4,959,439	+		Echvi_4141	0.82	+0.8
4,959,439	+		Echvi_4141	0.82	+0.2
4,959,439	+		Echvi_4141	0.82	+0.7
4,959,440	-		Echvi_4141	0.83	+0.8
4,959,440	-		Echvi_4141	0.83	+0.7
4,959,444	+		Echvi_4141	0.85	+0.5
4,959,444	+		Echvi_4141	0.85	+0.7
4,959,444	+		Echvi_4141	0.85	-0.0
4,959,444	+		Echvi_4141	0.85	+1.7
4,959,445	-		Echvi_4141	0.85	-0.4
4,959,445	-		Echvi_4141	0.85	+0.3
4,959,445	-		Echvi_4141	0.85	-1.9
4,959,455	-				-0.6
4,959,522	+				-0.4
4,959,568	-				+0.2
4,959,648	+		Echvi_4142	0.16	+1.1
4,959,684	+		Echvi_4142	0.19	+0.3
4,959,685	-		Echvi_4142	0.19	-1.1
4,959,692	-		Echvi_4142	0.20	-0.4
4,959,732	+		Echvi_4142	0.23	+1.5
4,959,732	+		Echvi_4142	0.23	-0.1
4,959,733	-		Echvi_4142	0.23	+0.4
4,959,738	+		Echvi_4142	0.24	-1.1
4,959,739	-		Echvi_4142	0.24	-0.1
4,959,740	+		Echvi_4142	0.24	-2.7
4,959,741	-		Echvi_4142	0.24	-2.4
4,959,741	-		Echvi_4142	0.24	+0.4
4,959,741	-		Echvi_4142	0.24	+0.7
4,959,741	-		Echvi_4142	0.24	+0.4
4,959,741	-		Echvi_4142	0.24	-0.2
4,959,741	-		Echvi_4142	0.24	+0.4
4,959,741	-		Echvi_4142	0.24	-0.2
4,959,741	-		Echvi_4142	0.24	+0.0
4,959,780	+		Echvi_4142	0.27	+0.2
4,959,789	+		Echvi_4142	0.28	-0.0
4,959,790	-		Echvi_4142	0.28	+0.6
4,959,790	-		Echvi_4142	0.28	+0.3
4,959,790	-		Echvi_4142	0.28	+0.7
4,959,791	+		Echvi_4142	0.28	+0.3
4,959,792	-		Echvi_4142	0.28	+0.1
4,959,794	+		Echvi_4142	0.29	-0.1
4,959,794	+		Echvi_4142	0.29	+0.3
4,959,795	-		Echvi_4142	0.29	-0.5
4,959,795	-				+1.7
4,959,815	+		Echvi_4142	0.30	-1.1
4,959,816	-		Echvi_4142	0.30	-0.4
4,959,887	+		Echvi_4142	0.36	+0.4
4,959,892	-		Echvi_4142	0.37	-0.1
4,959,892	-		Echvi_4142	0.37	+0.4
4,959,901	-		Echvi_4142	0.38	-0.2
4,959,906	-		Echvi_4142	0.38	-0.1
4,959,906	-		Echvi_4142	0.38	-2.4
4,959,908	-		Echvi_4142	0.38	+1.0
4,959,908	-		Echvi_4142	0.38	-0.1
4,959,908	-		Echvi_4142	0.38	-1.0
4,959,922	+		Echvi_4142	0.39	+1.3
4,959,922	+		Echvi_4142	0.39	+0.1
4,959,940	+		Echvi_4142	0.41	-0.3
4,959,940	+		Echvi_4142	0.41	-0.6
4,959,940	+		Echvi_4142	0.41	-0.1
4,959,940	+		Echvi_4142	0.41	-1.4
4,959,940	+		Echvi_4142	0.41	-0.5
4,959,940	+		Echvi_4142	0.41	-1.0
4,959,940	+		Echvi_4142	0.41	-0.3
4,959,941	-		Echvi_4142	0.41	-0.5
4,959,941	-		Echvi_4142	0.41	+0.4
4,959,957	+		Echvi_4142	0.42	-0.9
4,959,982	+		Echvi_4142	0.45	-0.9
4,960,041	+		Echvi_4142	0.50	-0.2
4,960,077	-		Echvi_4142	0.53	-0.4
4,960,104	+		Echvi_4142	0.55	+0.1
4,960,104	+		Echvi_4142	0.55	+0.1
4,960,107	+		Echvi_4142	0.55	+0.6
4,960,107	+		Echvi_4142	0.55	-0.6
4,960,107	+		Echvi_4142	0.55	-0.9
4,960,108	-		Echvi_4142	0.55	+0.9
4,960,108	-		Echvi_4142	0.55	-1.7
4,960,119	+		Echvi_4142	0.56	-1.0
4,960,134	+		Echvi_4142	0.58	+1.4
4,960,135	-		Echvi_4142	0.58	-0.2
4,960,185	-		Echvi_4142	0.62	+0.7
4,960,212	-		Echvi_4142	0.64	-1.9
4,960,212	-		Echvi_4142	0.64	-1.1
4,960,212	-		Echvi_4142	0.64	-0.1
4,960,212	-		Echvi_4142	0.64	+1.4
4,960,212	-		Echvi_4142	0.64	-0.1
4,960,231	-		Echvi_4142	0.66	-0.2
4,960,238	+		Echvi_4142	0.66	+0.6
4,960,238	+		Echvi_4142	0.66	+0.6
4,960,239	-		Echvi_4142	0.66	-0.3
4,960,258	+		Echvi_4142	0.68	+3.0
4,960,260	+		Echvi_4142	0.68	+0.6
4,960,261	-		Echvi_4142	0.68	-0.2
4,960,261	-		Echvi_4142	0.68	-1.2
4,960,293	-		Echvi_4142	0.71	-0.6
4,960,331	+		Echvi_4142	0.74	-0.2
4,960,380	+		Echvi_4142	0.79	-0.4
4,960,382	+		Echvi_4142	0.79	-1.5
4,960,382	+		Echvi_4142	0.79	-0.2
4,960,382	+		Echvi_4142	0.79	-0.9
4,960,408	-		Echvi_4142	0.81	+0.7
4,960,460	+		Echvi_4142	0.85	-1.3
4,960,461	-		Echvi_4142	0.85	-0.7
4,960,465	+		Echvi_4142	0.86	-0.3
4,960,466	-		Echvi_4142	0.86	+0.3
4,960,466	-		Echvi_4142	0.86	-1.4
4,960,469	+		Echvi_4142	0.86	+0.1
4,960,469	+		Echvi_4142	0.86	+0.1
4,960,469	+		Echvi_4142	0.86	-0.9
4,960,470	-		Echvi_4142	0.86	-0.5
4,960,470	-		Echvi_4142	0.86	-0.3
4,960,470	-		Echvi_4142	0.86	+3.3
4,960,470	-		Echvi_4142	0.86	+0.6
4,960,475	+		Echvi_4142	0.87	+0.2