Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3234

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
3,831,830	-		Echvi_3232	0.21	+0.1
3,831,830	-		Echvi_3232	0.21	-0.7
3,831,867	+		Echvi_3232	0.25	-1.0
3,831,950	+		Echvi_3232	0.34	+0.4
3,831,952	+		Echvi_3232	0.35	-0.4
3,831,970	-		Echvi_3232	0.36	-1.0
3,831,987	-		Echvi_3232	0.38	+0.1
3,831,995	-		Echvi_3232	0.39	-1.7
3,832,068	-		Echvi_3232	0.47	+0.3
3,832,074	-		Echvi_3232	0.48	+0.3
3,832,076	+		Echvi_3232	0.48	-0.3
3,832,095	-		Echvi_3232	0.50	+0.7
3,832,095	-		Echvi_3232	0.50	+1.3
3,832,133	+		Echvi_3232	0.54	-0.1
3,832,146	+		Echvi_3232	0.56	+0.4
3,832,147	-		Echvi_3232	0.56	+0.2
3,832,154	+		Echvi_3232	0.57	-1.0
3,832,154	+		Echvi_3232	0.57	+0.2
3,832,154	+		Echvi_3232	0.57	-0.7
3,832,155	-		Echvi_3232	0.57	-0.6
3,832,157	+		Echvi_3232	0.57	+0.7
3,832,157	+		Echvi_3232	0.57	+0.4
3,832,157	+		Echvi_3232	0.57	-0.6
3,832,157	+		Echvi_3232	0.57	-0.5
3,832,158	-		Echvi_3232	0.57	-1.2
3,832,158	-		Echvi_3232	0.57	+0.7
3,832,158	-		Echvi_3232	0.57	-0.0
3,832,158	-		Echvi_3232	0.57	+1.1
3,832,158	-		Echvi_3232	0.57	-2.2
3,832,160	-		Echvi_3232	0.57	+1.9
3,832,160	-		Echvi_3232	0.57	-0.1
3,832,197	-		Echvi_3232	0.61	+0.3
3,832,197	-		Echvi_3232	0.61	-0.2
3,832,198	+		Echvi_3232	0.61	+0.6
3,832,198	+		Echvi_3232	0.61	-0.0
3,832,198	+		Echvi_3232	0.61	+0.8
3,832,198	+		Echvi_3232	0.61	-0.2
3,832,199	-		Echvi_3232	0.61	-0.5
3,832,199	-		Echvi_3232	0.61	-0.2
3,832,236	+		Echvi_3232	0.65	-0.2
3,832,236	+		Echvi_3232	0.65	-0.2
3,832,236	+		Echvi_3232	0.65	+0.2
3,832,236	+		Echvi_3232	0.65	-0.6
3,832,236	+		Echvi_3232	0.65	-0.9
3,832,236	+		Echvi_3232	0.65	-0.6
3,832,236	+		Echvi_3232	0.65	-0.8
3,832,237	-		Echvi_3232	0.66	+0.2
3,832,237	-		Echvi_3232	0.66	-0.4
3,832,237	-		Echvi_3232	0.66	+0.0
3,832,237	-		Echvi_3232	0.66	-0.7
3,832,237	-		Echvi_3232	0.66	+0.2
3,832,237	-		Echvi_3232	0.66	-0.3
3,832,237	-		Echvi_3232	0.66	+0.0
3,832,237	-		Echvi_3232	0.66	-0.3
3,832,238	+		Echvi_3232	0.66	+0.7
3,832,238	+		Echvi_3232	0.66	-0.4
3,832,238	+		Echvi_3232	0.66	+0.6
3,832,239	-		Echvi_3232	0.66	+1.6
3,832,259	-		Echvi_3232	0.68	-0.2
3,832,343	+		Echvi_3232	0.77	+0.5
3,832,343	+		Echvi_3232	0.77	-0.6
3,832,344	-		Echvi_3232	0.77	-0.4
3,832,365	+		Echvi_3232	0.80	+0.2
3,832,366	-		Echvi_3232	0.80	-0.3
3,832,390	-		Echvi_3232	0.82	-1.2
3,832,390	-		Echvi_3232	0.82	-0.0
3,832,390	-		Echvi_3232	0.82	+1.2
3,832,450	+		Echvi_3232	0.89	+0.2
3,832,454	+		Echvi_3232	0.89	+1.2
3,832,455	-		Echvi_3232	0.89	+0.1
3,832,581	-		Echvi_3233	0.24	+0.3
3,832,592	+		Echvi_3233	0.30	+0.3
3,832,593	-		Echvi_3233	0.30	-0.2
3,832,600	-		Echvi_3233	0.34	-0.2
3,832,686	-		Echvi_3233	0.77	+0.3
3,832,692	+		Echvi_3233	0.80	+0.2
3,832,693	-		Echvi_3233	0.81	-0.1
3,832,693	-		Echvi_3233	0.81	+1.0
3,832,742	+				-0.3
3,832,743	-				+0.2
3,832,820	+		Echvi_3234	0.15	-1.1
3,832,821	-		Echvi_3234	0.15	-0.5
3,832,861	-		Echvi_3234	0.23	-0.3
3,832,959	+		Echvi_3234	0.43	-0.0
3,832,960	-		Echvi_3234	0.43	-0.5
3,832,968	+		Echvi_3234	0.44	-0.1
3,832,968	+		Echvi_3234	0.44	-0.3
3,832,968	+		Echvi_3234	0.44	+0.0
3,832,968	+		Echvi_3234	0.44	-1.2
3,832,968	+		Echvi_3234	0.44	+0.6
3,832,968	+		Echvi_3234	0.44	+1.0
3,832,968	+		Echvi_3234	0.44	+0.0
3,832,969	-		Echvi_3234	0.45	-0.0
3,832,969	-		Echvi_3234	0.45	-0.8
3,832,969	-		Echvi_3234	0.45	+0.1
3,832,969	-		Echvi_3234	0.45	-0.6
3,832,969	-		Echvi_3234	0.45	-1.4
3,832,969	-		Echvi_3234	0.45	-0.1
3,832,970	+		Echvi_3234	0.45	-0.2
3,832,971	-		Echvi_3234	0.45	-0.6
3,832,971	-		Echvi_3234	0.45	-0.6
3,833,033	-		Echvi_3234	0.57	-0.3
3,833,034	+		Echvi_3234	0.58	-0.7
3,833,034	+		Echvi_3234	0.58	+1.6
3,833,035	-		Echvi_3234	0.58	-0.0
3,833,045	+		Echvi_3234	0.60	+0.9
3,833,045	+		Echvi_3234	0.60	-1.7
3,833,045	+		Echvi_3234	0.60	-0.1
3,833,045	+		Echvi_3234	0.60	-0.4
3,833,045	+		Echvi_3234	0.60	+0.3
3,833,046	-		Echvi_3234	0.60	-0.0
3,833,047	+		Echvi_3234	0.60	-1.0
3,833,067	+		Echvi_3234	0.64	-2.4
3,833,067	+		Echvi_3234	0.64	+0.5
3,833,132	+		Echvi_3234	0.77	-1.1
3,833,166	+		Echvi_3234	0.84	+0.8
3,833,176	+		Echvi_3234	0.86	+0.7
3,833,176	+		Echvi_3234	0.86	-0.3
3,833,176	+		Echvi_3234	0.86	+0.0
3,833,176	+		Echvi_3234	0.86	+0.5
3,833,176	+		Echvi_3234	0.86	-1.1
3,833,176	+		Echvi_3234	0.86	-0.6
3,833,176	+		Echvi_3234	0.86	-0.1
3,833,177	-		Echvi_3234	0.86	-1.3
3,833,177	-		Echvi_3234	0.86	-0.5
3,833,177	-		Echvi_3234	0.86	-1.1
3,833,177	-		Echvi_3234	0.86	+0.1
3,833,177	-		Echvi_3234	0.86	-1.6
3,833,177	-		Echvi_3234	0.86	+0.4
3,833,177	-		Echvi_3234	0.86	+0.4
3,833,177	-		Echvi_3234	0.86	-0.9
3,833,177	-		Echvi_3234	0.86	-0.7
3,833,177	-		Echvi_3234	0.86	+0.6
3,833,177	-		Echvi_3234	0.86	-0.5
3,833,197	-				+1.4
3,833,197	-				+0.2
3,833,254	-				+2.6
3,833,311	+				-1.1
3,833,312	-				-0.5
3,833,392	-				-0.4
3,833,439	+				-0.2
3,833,446	-				+0.1
3,833,479	-				+0.3
3,833,510	+				+0.1
3,833,511	-				-0.2
3,833,521	-				-0.3
3,833,521	-				-0.2
3,833,651	+				-0.0
3,833,660	+				-0.7
3,833,661	-				-0.2
3,833,663	-				+0.2
3,833,663	-				+0.3
3,833,663	-				-0.7
3,833,663	-				-1.5
3,833,663	-				-1.1
3,833,663	-				-2.3
3,833,676	-				+0.2
3,833,713	-				+0.4
3,833,713	-				-0.8
3,833,767	+				+0.9
3,833,768	-				-0.0
3,833,848	-				-1.7
3,833,850	-				-0.8
3,833,934	-		Echvi_3235	0.11	-0.0
3,833,990	+		Echvi_3235	0.12	+0.9
3,833,991	-		Echvi_3235	0.12	+1.0
3,833,993	+		Echvi_3235	0.12	+0.2
3,833,994	-		Echvi_3235	0.12	+0.1
3,834,076	-		Echvi_3235	0.14	-1.7
3,834,120	+		Echvi_3235	0.15	-0.1
3,834,121	-		Echvi_3235	0.15	+0.1
3,834,158	+		Echvi_3235	0.15	+0.1
3,834,173	+		Echvi_3235	0.16	-0.0
3,834,176	+		Echvi_3235	0.16	-0.0
3,834,176	+		Echvi_3235	0.16	+0.2
3,834,177	-		Echvi_3235	0.16	+1.0
3,834,224	+		Echvi_3235	0.17	+0.4
3,834,230	-		Echvi_3235	0.17	-0.8