Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3231

Experiment: marine broth

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	marine broth
3,828,626	+		Echvi_3230	0.33	+1.6
3,828,626	+		Echvi_3230	0.33	-0.5
3,828,650	-		Echvi_3230	0.34	+0.9
3,828,715	+		Echvi_3230	0.40	+1.2
3,828,729	+		Echvi_3230	0.41	+0.1
3,828,730	-		Echvi_3230	0.41	+1.1
3,828,732	-		Echvi_3230	0.41	-0.3
3,828,732	-		Echvi_3230	0.41	-2.4
3,828,732	-		Echvi_3230	0.41	-0.2
3,828,772	+		Echvi_3230	0.44	-0.3
3,828,776	-		Echvi_3230	0.44	-0.3
3,828,825	+		Echvi_3230	0.48	-0.4
3,828,827	+		Echvi_3230	0.48	-0.9
3,828,827	+		Echvi_3230	0.48	+0.5
3,828,827	+		Echvi_3230	0.48	-0.4
3,828,827	+		Echvi_3230	0.48	+0.6
3,828,828	-		Echvi_3230	0.48	-0.5
3,828,828	-		Echvi_3230	0.48	-0.6
3,828,828	-		Echvi_3230	0.48	-0.0
3,828,831	+		Echvi_3230	0.49	+0.0
3,828,831	+		Echvi_3230	0.49	+0.1
3,828,832	-		Echvi_3230	0.49	+0.6
3,828,832	-		Echvi_3230	0.49	-0.1
3,828,878	+		Echvi_3230	0.52	-0.1
3,828,884	-		Echvi_3230	0.53	+0.4
3,828,884	-		Echvi_3230	0.53	-0.0
3,828,894	-		Echvi_3230	0.53	+0.6
3,828,894	-		Echvi_3230	0.53	+1.1
3,829,002	-		Echvi_3230	0.62	-0.2
3,829,028	+		Echvi_3230	0.64	-0.8
3,829,112	+		Echvi_3230	0.70	-0.8
3,829,113	-		Echvi_3230	0.70	-0.4
3,829,141	-		Echvi_3230	0.73	+0.8
3,829,200	-		Echvi_3230	0.77	+1.3
3,829,248	+		Echvi_3230	0.81	-0.7
3,829,249	-		Echvi_3230	0.81	-0.5
3,829,261	-		Echvi_3230	0.82	-0.7
3,829,262	+		Echvi_3230	0.82	+0.5
3,829,262	+		Echvi_3230	0.82	-1.0
3,829,292	+		Echvi_3230	0.84	-0.2
3,829,356	+		Echvi_3230	0.89	-1.2
3,829,357	-		Echvi_3230	0.89	-1.5
3,829,492	+				-0.0
3,829,492	+				+0.3
3,829,493	-				-1.2
3,829,642	+				-2.2
3,829,642	+				-0.5
3,829,654	-				-0.6
3,829,658	-				-1.1
3,829,682	+				+0.2
3,829,695	-				+0.6
3,829,746	+				-1.4
3,829,790	+				-0.3
3,829,790	+				-0.4
3,829,791	-				-0.0
3,829,792	+				+0.7
3,829,793	-				-1.2
3,829,793	-				-0.7
3,829,795	+				-0.8
3,829,795	+				+1.1
3,829,922	-		Echvi_3231	0.16	-0.2
3,829,965	-		Echvi_3231	0.18	+0.4
3,829,966	+		Echvi_3231	0.18	+2.9
3,829,966	+		Echvi_3231	0.18	-0.7
3,829,966	+		Echvi_3231	0.18	-1.5
3,829,967	-		Echvi_3231	0.18	+0.6
3,829,967	-		Echvi_3231	0.18	-0.9
3,829,968	+		Echvi_3231	0.18	+0.1
3,829,968	+		Echvi_3231	0.18	+0.2
3,829,968	+		Echvi_3231	0.18	-0.1
3,829,969	-		Echvi_3231	0.18	-0.2
3,829,969	-		Echvi_3231	0.18	-0.6
3,829,999	-		Echvi_3231	0.20	-1.9
3,830,033	-		Echvi_3231	0.22	-0.0
3,830,044	+		Echvi_3231	0.22	-0.6
3,830,044	+		Echvi_3231	0.22	-0.6
3,830,045	-		Echvi_3231	0.22	+1.0
3,830,128	+		Echvi_3231	0.26	+0.6
3,830,141	+		Echvi_3231	0.27	-0.3
3,830,195	-		Echvi_3231	0.30	+0.0
3,830,199	+		Echvi_3231	0.30	-1.0
3,830,200	-		Echvi_3231	0.30	+0.6
3,830,200	-		Echvi_3231	0.30	+0.6
3,830,200	-		Echvi_3231	0.30	-0.5
3,830,202	+		Echvi_3231	0.30	-0.2
3,830,202	+		Echvi_3231	0.30	-0.1
3,830,215	-		Echvi_3231	0.31	-0.0
3,830,231	+		Echvi_3231	0.31	-0.8
3,830,241	+		Echvi_3231	0.32	-0.5
3,830,249	+		Echvi_3231	0.32	-0.5
3,830,249	+		Echvi_3231	0.32	-0.8
3,830,250	-		Echvi_3231	0.32	-1.0
3,830,285	+		Echvi_3231	0.34	-0.2
3,830,285	+		Echvi_3231	0.34	-0.7
3,830,285	+		Echvi_3231	0.34	+0.6
3,830,286	-		Echvi_3231	0.34	+1.2
3,830,287	+		Echvi_3231	0.34	-0.9
3,830,287	+		Echvi_3231	0.34	-0.6
3,830,287	+		Echvi_3231	0.34	-0.2
3,830,287	+		Echvi_3231	0.34	-1.1
3,830,288	-		Echvi_3231	0.34	-0.3
3,830,288	-		Echvi_3231	0.34	-0.1
3,830,288	-		Echvi_3231	0.34	+0.8
3,830,288	-		Echvi_3231	0.34	-1.3
3,830,292	-		Echvi_3231	0.34	-0.6
3,830,299	+		Echvi_3231	0.35	-1.4
3,830,327	+		Echvi_3231	0.36	-0.7
3,830,328	-		Echvi_3231	0.36	-0.7
3,830,338	-		Echvi_3231	0.37	-0.1
3,830,357	+		Echvi_3231	0.38	-1.0
3,830,357	+		Echvi_3231	0.38	+0.0
3,830,357	+		Echvi_3231	0.38	-1.0
3,830,358	-		Echvi_3231	0.38	-0.4
3,830,364	+		Echvi_3231	0.38	+0.5
3,830,365	-		Echvi_3231	0.38	+0.4
3,830,378	+		Echvi_3231	0.39	+1.1
3,830,420	-		Echvi_3231	0.41	+0.4
3,830,452	-		Echvi_3231	0.42	-0.5
3,830,462	+		Echvi_3231	0.43	-1.0
3,830,462	+		Echvi_3231	0.43	-0.2
3,830,474	+		Echvi_3231	0.43	-0.3
3,830,474	+		Echvi_3231	0.43	+0.3
3,830,476	+		Echvi_3231	0.44	-0.4
3,830,476	+		Echvi_3231	0.44	-0.4
3,830,476	+		Echvi_3231	0.44	-0.4
3,830,477	-		Echvi_3231	0.44	-0.4
3,830,487	+		Echvi_3231	0.44	+0.7
3,830,487	+		Echvi_3231	0.44	-0.0
3,830,500	+		Echvi_3231	0.45	+0.1
3,830,545	+		Echvi_3231	0.47	+0.8
3,830,545	+		Echvi_3231	0.47	-0.5
3,830,545	+		Echvi_3231	0.47	+0.7
3,830,545	+		Echvi_3231	0.47	-0.8
3,830,545	+		Echvi_3231	0.47	-0.3
3,830,546	-		Echvi_3231	0.47	+0.4
3,830,546	-		Echvi_3231	0.47	-0.8
3,830,546	-		Echvi_3231	0.47	-0.3
3,830,547	+		Echvi_3231	0.47	-0.5
3,830,598	-		Echvi_3231	0.50	-0.7
3,830,691	+		Echvi_3231	0.54	-0.7
3,830,691	+		Echvi_3231	0.54	-0.7
3,830,692	-		Echvi_3231	0.54	+1.2
3,830,796	-		Echvi_3231	0.59	-0.0
3,830,837	-		Echvi_3231	0.61	-1.1
3,830,837	-		Echvi_3231	0.61	+0.0
3,830,859	+		Echvi_3231	0.63	-0.0
3,830,913	+		Echvi_3231	0.65	-1.9
3,830,916	-		Echvi_3231	0.65	-0.0
3,830,938	+		Echvi_3231	0.66	-0.2
3,830,938	+		Echvi_3231	0.66	-0.5
3,830,939	-		Echvi_3231	0.66	-0.1
3,830,976	+		Echvi_3231	0.68	+1.6
3,830,976	+		Echvi_3231	0.68	-0.7
3,830,977	-		Echvi_3231	0.68	-0.8
3,831,038	-		Echvi_3231	0.71	-0.2
3,831,041	-		Echvi_3231	0.72	-0.4
3,831,051	+		Echvi_3231	0.72	-0.5
3,831,052	-		Echvi_3231	0.72	-0.1
3,831,052	-		Echvi_3231	0.72	-0.2
3,831,052	-		Echvi_3231	0.72	-0.4
3,831,092	+		Echvi_3231	0.74	+0.2
3,831,133	+		Echvi_3231	0.76	+0.1
3,831,138	+		Echvi_3231	0.76	-0.4
3,831,139	-		Echvi_3231	0.76	-0.4
3,831,199	-		Echvi_3231	0.79	-0.7
3,831,252	+		Echvi_3231	0.82	+1.0
3,831,335	-		Echvi_3231	0.86	-0.6
3,831,338	+		Echvi_3231	0.86	-0.3
3,831,339	-		Echvi_3231	0.86	-0.4
3,831,430	-				-0.5
3,831,430	-				-1.1
3,831,469	+				+2.2
3,831,497	+				-0.7
3,831,621	-				+0.4
3,831,622	+				+1.2
3,831,622	+				-1.1
3,831,625	+				+0.1
3,831,626	-				+0.1
3,831,628	+				-1.2
3,831,655	+				+0.2
3,831,667	-				-1.3
3,831,667	-				-0.3
3,831,667	-				+1.1
3,831,667	-				+0.1
3,831,667	-				-0.1
3,831,717	-				-1.7
3,831,830	-		Echvi_3232	0.21	+0.1
3,831,830	-		Echvi_3232	0.21	-0.7
3,831,867	+		Echvi_3232	0.25	-1.0
3,831,950	+		Echvi_3232	0.34	+0.4
3,831,952	+		Echvi_3232	0.35	-0.4
3,831,970	-		Echvi_3232	0.36	-1.0
3,831,987	-		Echvi_3232	0.38	+0.1
3,831,995	-		Echvi_3232	0.39	-1.7
3,832,068	-		Echvi_3232	0.47	+0.3
3,832,074	-		Echvi_3232	0.48	+0.3
3,832,076	+		Echvi_3232	0.48	-0.3
3,832,095	-		Echvi_3232	0.50	+0.7
3,832,095	-		Echvi_3232	0.50	+1.3
3,832,133	+		Echvi_3232	0.54	-0.1
3,832,146	+		Echvi_3232	0.56	+0.4
3,832,147	-		Echvi_3232	0.56	+0.2
3,832,154	+		Echvi_3232	0.57	-1.0
3,832,154	+		Echvi_3232	0.57	+0.2
3,832,154	+		Echvi_3232	0.57	-0.7
3,832,155	-		Echvi_3232	0.57	-0.6
3,832,157	+		Echvi_3232	0.57	+0.7
3,832,157	+		Echvi_3232	0.57	+0.4
3,832,157	+		Echvi_3232	0.57	-0.6
3,832,157	+		Echvi_3232	0.57	-0.5
3,832,158	-		Echvi_3232	0.57	-1.2
3,832,158	-		Echvi_3232	0.57	+0.7
3,832,158	-		Echvi_3232	0.57	-0.0
3,832,158	-		Echvi_3232	0.57	+1.1
3,832,158	-		Echvi_3232	0.57	-2.2
3,832,160	-		Echvi_3232	0.57	+1.9
3,832,160	-		Echvi_3232	0.57	-0.1
3,832,197	-		Echvi_3232	0.61	+0.3
3,832,197	-		Echvi_3232	0.61	-0.2
3,832,198	+		Echvi_3232	0.61	+0.6
3,832,198	+		Echvi_3232	0.61	-0.0
3,832,198	+		Echvi_3232	0.61	+0.8
3,832,198	+		Echvi_3232	0.61	-0.2
3,832,199	-		Echvi_3232	0.61	-0.5
3,832,199	-		Echvi_3232	0.61	-0.2
3,832,236	+		Echvi_3232	0.65	-0.2
3,832,236	+		Echvi_3232	0.65	-0.2
3,832,236	+		Echvi_3232	0.65	+0.2
3,832,236	+		Echvi_3232	0.65	-0.6
3,832,236	+		Echvi_3232	0.65	-0.9
3,832,236	+		Echvi_3232	0.65	-0.6
3,832,236	+		Echvi_3232	0.65	-0.8
3,832,237	-		Echvi_3232	0.66	+0.2
3,832,237	-		Echvi_3232	0.66	-0.4
3,832,237	-		Echvi_3232	0.66	+0.0
3,832,237	-		Echvi_3232	0.66	-0.7
3,832,237	-		Echvi_3232	0.66	+0.2
3,832,237	-		Echvi_3232	0.66	-0.3
3,832,237	-		Echvi_3232	0.66	+0.0
3,832,237	-		Echvi_3232	0.66	-0.3
3,832,238	+		Echvi_3232	0.66	+0.7
3,832,238	+		Echvi_3232	0.66	-0.4
3,832,238	+		Echvi_3232	0.66	+0.6
3,832,239	-		Echvi_3232	0.66	+1.6
3,832,259	-		Echvi_3232	0.68	-0.2
3,832,343	+		Echvi_3232	0.77	+0.5
3,832,343	+		Echvi_3232	0.77	-0.6
3,832,344	-		Echvi_3232	0.77	-0.4
3,832,365	+		Echvi_3232	0.80	+0.2
3,832,366	-		Echvi_3232	0.80	-0.3
3,832,390	-		Echvi_3232	0.82	-1.2
3,832,390	-		Echvi_3232	0.82	-0.0
3,832,390	-		Echvi_3232	0.82	+1.2
3,832,450	+		Echvi_3232	0.89	+0.2
3,832,454	+		Echvi_3232	0.89	+1.2
3,832,455	-		Echvi_3232	0.89	+0.1
3,832,581	-		Echvi_3233	0.24	+0.3
3,832,592	+		Echvi_3233	0.30	+0.3
3,832,593	-		Echvi_3233	0.30	-0.2
3,832,600	-		Echvi_3233	0.34	-0.2