Strain Fitness in Pseudomonas sp. RS175 around PFR28_03427

Experiment: L-Malic (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Malic (C) 10 mM
3,933,469	+		PFR28_03426	0.13	-0.2
3,933,470	-		PFR28_03426	0.13	-0.5
3,933,470	-		PFR28_03426	0.13	-1.1
3,933,520	+		PFR28_03426	0.19	+0.4
3,933,520	+		PFR28_03426	0.19	-0.9
3,933,521	-		PFR28_03426	0.19	-2.3
3,933,521	-		PFR28_03426	0.19	+0.7
3,933,521	-		PFR28_03426	0.19	-0.9
3,933,589	+		PFR28_03426	0.26	-0.2
3,933,589	+		PFR28_03426	0.26	-1.1
3,933,589	+		PFR28_03426	0.26	-0.2
3,933,589	+		PFR28_03426	0.26	+0.5
3,933,590	-		PFR28_03426	0.26	+0.5
3,933,590	-		PFR28_03426	0.26	-2.9
3,933,590	-		PFR28_03426	0.26	-0.3
3,933,784	+		PFR28_03426	0.47	-0.1
3,933,786	+		PFR28_03426	0.48	+0.7
3,933,786	+		PFR28_03426	0.48	+1.1
3,933,786	+		PFR28_03426	0.48	+1.3
3,933,786	+		PFR28_03426	0.48	-2.1
3,933,786	+		PFR28_03426	0.48	+0.0
3,933,787	-		PFR28_03426	0.48	+0.1
3,933,787	-		PFR28_03426	0.48	+0.1
3,933,787	-		PFR28_03426	0.48	-0.3
3,933,787	-		PFR28_03426	0.48	+0.1
3,933,787	-		PFR28_03426	0.48	-0.5
3,933,787	-		PFR28_03426	0.48	-0.2
3,933,787	-		PFR28_03426	0.48	+0.1
3,933,787	-		PFR28_03426	0.48	-1.3
3,933,787	-		PFR28_03426	0.48	+0.1
3,933,787	-		PFR28_03426	0.48	+0.0
3,933,787	-		PFR28_03426	0.48	-2.3
3,933,787	-		PFR28_03426	0.48	-0.3
3,933,787	-		PFR28_03426	0.48	+1.2
3,933,787	-		PFR28_03426	0.48	-1.6
3,933,787	-		PFR28_03426	0.48	-0.5
3,933,787	-		PFR28_03426	0.48	-1.1
3,934,096	+		PFR28_03426	0.81	+0.4
3,934,096	+		PFR28_03426	0.81	+1.3
3,934,096	+		PFR28_03426	0.81	+0.2
3,934,096	+		PFR28_03426	0.81	+0.8
3,934,096	+		PFR28_03426	0.81	+1.2
3,934,096	+		PFR28_03426	0.81	-1.8
3,934,096	+		PFR28_03426	0.81	+2.7
3,934,096	+		PFR28_03426	0.81	-0.3
3,934,096	+		PFR28_03426	0.81	-0.8
3,934,096	+		PFR28_03426	0.81	+0.4
3,934,097	-		PFR28_03426	0.81	+0.8
3,934,097	-		PFR28_03426	0.81	+0.8
3,934,097	-		PFR28_03426	0.81	-0.4
3,934,097	-		PFR28_03426	0.81	-0.3
3,934,097	-		PFR28_03426	0.81	-1.5
3,934,097	-		PFR28_03426	0.81	-0.5
3,934,118	+		PFR28_03426	0.84	-0.7
3,934,118	+		PFR28_03426	0.84	-0.1
3,934,119	-		PFR28_03426	0.84	+0.3
3,934,119	-		PFR28_03426	0.84	-1.2
3,934,147	+		PFR28_03426	0.87	+0.1
3,934,147	+		PFR28_03426	0.87	+0.5
3,934,234	+				-0.0
3,934,234	+				-0.3
3,934,234	+				+0.0
3,934,234	+				-0.5
3,934,235	-				-0.3
3,934,235	-				-0.7
3,934,235	-				-2.4
3,934,275	+				+0.9
3,934,379	+				-1.5
3,934,416	+				+0.3
3,934,429	+				-1.3
3,934,432	+				-0.3
3,934,432	+				-1.9
3,934,564	+		PFR28_03427	0.12	+1.3
3,934,564	+		PFR28_03427	0.12	-1.9
3,934,565	-		PFR28_03427	0.12	-0.9
3,934,565	-		PFR28_03427	0.12	-1.3
3,934,592	-		PFR28_03427	0.14	-3.0
3,934,592	-		PFR28_03427	0.14	-2.6
3,934,592	-		PFR28_03427	0.14	-2.0
3,934,783	+		PFR28_03427	0.23	+0.8
3,934,784	-		PFR28_03427	0.23	-1.7
3,934,784	-		PFR28_03427	0.23	-0.5
3,934,930	+		PFR28_03427	0.30	+0.0
3,934,930	+		PFR28_03427	0.30	-0.2
3,934,930	+		PFR28_03427	0.30	-2.1
3,934,930	+		PFR28_03427	0.30	-0.5
3,934,930	+		PFR28_03427	0.30	-1.9
3,934,930	+		PFR28_03427	0.30	+0.6
3,934,931	-		PFR28_03427	0.30	-2.0
3,934,931	-		PFR28_03427	0.30	-0.6
3,935,062	+		PFR28_03427	0.37	-1.0
3,935,062	+		PFR28_03427	0.37	-0.4
3,935,132	+		PFR28_03427	0.40	-1.1
3,935,132	+		PFR28_03427	0.40	+1.7
3,935,133	-		PFR28_03427	0.40	-0.5
3,935,173	+		PFR28_03427	0.42	-2.9
3,935,173	+		PFR28_03427	0.42	-0.5
3,935,174	-		PFR28_03427	0.42	-3.5
3,935,174	-		PFR28_03427	0.42	-2.0
3,935,174	-		PFR28_03427	0.42	-1.1
3,935,233	+		PFR28_03427	0.45	+1.5
3,935,233	+		PFR28_03427	0.45	+0.7
3,935,233	+		PFR28_03427	0.45	-1.3
3,935,336	-		PFR28_03427	0.50	-1.7
3,935,370	+		PFR28_03427	0.52	-1.6
3,935,370	+		PFR28_03427	0.52	+0.7
3,935,370	+		PFR28_03427	0.52	+0.5
3,935,370	+		PFR28_03427	0.52	-2.4
3,935,370	+		PFR28_03427	0.52	-0.4
3,935,370	+		PFR28_03427	0.52	+0.0
3,935,370	+		PFR28_03427	0.52	-2.6
3,935,370	+		PFR28_03427	0.52	-2.8
3,935,370	+		PFR28_03427	0.52	+1.1
3,935,371	-		PFR28_03427	0.52	-1.9
3,935,371	-		PFR28_03427	0.52	+1.7
3,935,371	-		PFR28_03427	0.52	-2.5
3,935,426	-		PFR28_03427	0.55	-1.9
3,935,426	-		PFR28_03427	0.55	+0.5
3,935,426	-		PFR28_03427	0.55	-0.5
3,935,984	+		PFR28_03427	0.82	-3.2
3,935,985	-		PFR28_03427	0.82	-1.9
3,936,144	+		PFR28_03427	0.90	+1.0
3,936,145	-				-2.2
3,936,145	-				-0.4
3,936,145	-				-2.3
3,936,376	-				+0.7
3,936,471	-		PFR28_03428	0.21	+0.4
3,936,493	+		PFR28_03428	0.24	-0.2
3,936,494	-		PFR28_03428	0.25	+0.7
3,936,556	+		PFR28_03428	0.35	-0.4
3,936,556	+		PFR28_03428	0.35	+0.1
3,936,557	-		PFR28_03428	0.35	+0.5
3,936,557	-		PFR28_03428	0.35	-0.0
3,936,559	+		PFR28_03428	0.36	+0.1
3,936,559	+		PFR28_03428	0.36	-1.0
3,936,560	-		PFR28_03428	0.36	-0.2
3,936,560	-		PFR28_03428	0.36	-1.4
3,936,560	-		PFR28_03428	0.36	+1.3
3,936,560	-		PFR28_03428	0.36	+0.3
3,936,560	-		PFR28_03428	0.36	-0.6
3,936,615	+		PFR28_03428	0.45	-1.5
3,936,761	+		PFR28_03428	0.70	+0.7
3,936,761	+		PFR28_03428	0.70	+0.4
3,936,762	-		PFR28_03428	0.71	-2.0
3,936,762	-		PFR28_03428	0.71	-0.1
3,936,762	-		PFR28_03428	0.71	-0.5
3,936,825	+		PFR28_03428	0.81	+1.3
3,936,825	+		PFR28_03428	0.81	+1.4
3,936,826	-		PFR28_03428	0.82	+0.2
3,937,093	-		PFR28_03429	0.10	-0.4
3,937,240	+		PFR28_03429	0.26	+0.6