Strain Fitness in Pseudomonas sp. RS175 around PFR28_00098

Experiment: L-Malic (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Malic (C) 10 mM
108,451	+		PFR28_00096	0.70	+0.3
108,451	+		PFR28_00096	0.70	-0.4
108,451	+		PFR28_00096	0.70	-2.6
108,451	+		PFR28_00096	0.70	-2.1
108,451	+		PFR28_00096	0.70	-1.7
108,451	+		PFR28_00096	0.70	-0.7
108,451	+		PFR28_00096	0.70	-0.3
108,451	+		PFR28_00096	0.70	-0.0
108,451	+		PFR28_00096	0.70	-0.1
108,452	-		PFR28_00096	0.70	-3.8
108,452	-		PFR28_00096	0.70	+1.1
108,452	-		PFR28_00096	0.70	-2.7
108,452	-		PFR28_00096	0.70	-0.8
108,452	-		PFR28_00096	0.70	+0.9
108,455	+		PFR28_00096	0.70	+0.9
108,456	-		PFR28_00096	0.70	-0.4
108,456	-		PFR28_00096	0.70	+0.7
108,456	-		PFR28_00096	0.70	-0.1
108,496	+		PFR28_00096	0.78	+0.4
108,725	+				-0.1
108,725	+				-0.0
108,725	+				+0.5
108,725	+				-1.1
108,726	-				+0.9
108,726	-				+0.4
108,726	-				+0.6
108,726	-				-0.4
108,726	-				-0.8
108,726	-				+1.4
108,731	+				-0.4
108,731	+				-0.1
108,731	+				+2.2
108,731	+				+0.0
108,731	+				-2.5
108,731	+				-0.1
108,731	+				+0.2
108,732	-				+1.2
108,732	-				-1.2
108,754	+				+0.6
108,764	+				+1.8
108,764	+				+0.2
108,764	+				-0.9
108,764	+				+1.0
108,764	+				+0.8
108,764	+				+1.8
108,764	+				-0.8
108,764	+				-0.5
108,764	+				+0.6
108,764	+				+0.5
108,765	-				+0.3
108,765	-				-0.5
108,765	-				-0.3
108,765	-				+0.5
108,765	-				+1.0
108,765	-				-0.1
108,765	-				-0.4
108,765	-				+0.3
108,765	-				-0.8
108,765	-				+1.5
108,766	+				+0.0
108,766	+				+1.0
108,766	+				-1.0
108,767	-				-0.8
108,767	-				+1.6
108,767	-				+0.3
108,832	+				+1.2
108,973	+		PFR28_00097	0.18	-1.1
108,973	+		PFR28_00097	0.18	-0.7
108,974	-		PFR28_00097	0.18	-0.9
108,974	-		PFR28_00097	0.18	-1.2
108,984	+		PFR28_00097	0.21	+0.5
108,996	-		PFR28_00097	0.25	-1.7
108,996	-		PFR28_00097	0.25	+0.9
109,108	+		PFR28_00097	0.62	+0.2
109,108	+		PFR28_00097	0.62	-0.2
109,108	+		PFR28_00097	0.62	-1.7
109,108	+		PFR28_00097	0.62	-0.2
109,109	-		PFR28_00097	0.62	+1.3
109,109	-		PFR28_00097	0.62	-1.2
109,109	-		PFR28_00097	0.62	-0.3
109,196	-				+0.4
109,209	+				-0.5
109,209	+				-0.6
109,210	-				-0.7
109,331	+				+0.1
109,331	+				-3.2
109,331	+				-3.0
109,331	+				-1.6
109,331	+				-1.7
109,331	+				-2.2
109,331	+				-2.3
109,331	+				-2.9
109,331	+				-2.4
109,331	+				-0.1
109,332	-				-3.5
109,332	-				-1.3
109,332	-				-4.1
109,332	-				-2.8
109,365	+		PFR28_00098	0.12	-1.0
109,365	+		PFR28_00098	0.12	-0.5
109,365	+		PFR28_00098	0.12	-1.8
109,366	-		PFR28_00098	0.12	-3.4
109,366	-		PFR28_00098	0.12	+0.5
109,366	-		PFR28_00098	0.12	-2.4
109,366	-		PFR28_00098	0.12	-2.4
109,622	+		PFR28_00098	0.42	-2.7
109,623	-		PFR28_00098	0.42	-1.8
109,667	+		PFR28_00098	0.47	-2.2
109,667	+		PFR28_00098	0.47	-3.3
109,667	+		PFR28_00098	0.47	-2.4
109,667	+		PFR28_00098	0.47	-1.6
109,667	+		PFR28_00098	0.47	-1.1
109,667	+		PFR28_00098	0.47	-4.1
109,668	-		PFR28_00098	0.48	-2.3
109,668	-		PFR28_00098	0.48	-2.0
109,668	-		PFR28_00098	0.48	-0.7
109,668	-		PFR28_00098	0.48	-2.2
109,668	-		PFR28_00098	0.48	-2.4
109,897	+		PFR28_00098	0.75	-2.1
109,897	+		PFR28_00098	0.75	-2.1
109,897	+		PFR28_00098	0.75	-0.7
109,897	+		PFR28_00098	0.75	-2.2
110,101	+				-2.3
110,101	+				-0.8
110,102	-				-1.0
110,102	-				-1.6
110,102	-				-1.5
110,102	-				-0.4
110,102	-				-1.2
110,102	-				-1.8
110,102	-				-0.8
110,143	-				-1.4
110,143	-				-0.1
110,144	+				-1.7
110,144	+				+1.1
110,144	+				-0.5
110,144	+				+0.6
110,145	-				-0.3
110,145	-				-0.2
110,272	+				+0.5
110,273	-				+0.7
110,273	-				+1.3
110,273	-				-0.3
110,282	+				+0.7
110,282	+				+0.4
110,283	-				+0.5
110,283	-				-0.6
110,283	-				+0.3
110,283	-				-0.6
110,283	-				-0.9
110,283	-				+0.1
110,283	-				+0.6
110,372	+				-0.1
110,373	-				-1.1
110,424	+				+0.5
110,424	+				+0.9
110,424	+				+1.0
110,424	+				-1.0
110,424	+				-0.9
110,424	+				-1.8
110,425	-				+0.5
110,425	-				+1.3
110,425	-				-1.4
110,425	-				-0.4
110,425	-				-0.5
110,425	-				-0.3
110,447	-				-0.0
110,618	+				-0.2
110,618	+				+1.0
110,618	+				-0.8
110,619	-				-0.1
110,714	+		PFR28_00099	0.14	+1.5
110,714	+		PFR28_00099	0.14	-0.3
110,731	+		PFR28_00099	0.15	-0.0
110,731	+		PFR28_00099	0.15	+1.7
110,731	+		PFR28_00099	0.15	-0.2
110,732	-		PFR28_00099	0.15	-0.7
110,732	-		PFR28_00099	0.15	-0.9
110,732	-		PFR28_00099	0.15	+0.7
111,005	+		PFR28_00099	0.27	-0.1
111,005	+		PFR28_00099	0.27	-1.2
111,005	+		PFR28_00099	0.27	-0.6
111,005	+		PFR28_00099	0.27	+0.1
111,005	+		PFR28_00099	0.27	-0.2
111,005	+		PFR28_00099	0.27	-2.7
111,005	+		PFR28_00099	0.27	+2.0
111,005	+		PFR28_00099	0.27	+0.5
111,005	+		PFR28_00099	0.27	+0.5
111,005	+		PFR28_00099	0.27	-3.7
111,006	-		PFR28_00099	0.27	-0.1
111,006	-		PFR28_00099	0.27	+0.7
111,006	-		PFR28_00099	0.27	+0.4
111,006	-		PFR28_00099	0.27	-0.4
111,006	-		PFR28_00099	0.27	-0.2
111,032	+		PFR28_00099	0.28	+1.3
111,032	+		PFR28_00099	0.28	+0.5
111,033	-		PFR28_00099	0.28	-0.0