Experiment: LB_plus_SM_buffer
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2759 and GFF2760 overlap by 1 nucleotides GFF2760 and GFF2761 overlap by 4 nucleotides GFF2761 and GFF2762 overlap by 4 nucleotides
GFF2759 - Respiratory nitrate reductase gamma chain (EC 1.7.99.4), at 280,766 to 281,443
GFF2759
GFF2760 - Respiratory nitrate reductase delta chain (EC 1.7.99.4), at 281,443 to 282,153
GFF2760
GFF2761 - Respiratory nitrate reductase beta chain (EC 1.7.99.4), at 282,150 to 283,685
GFF2761
GFF2762 - Respiratory nitrate reductase alpha chain (EC 1.7.99.4), at 283,682 to 287,425
GFF2762
Position (kb) 282
283
284 Strain fitness (log2 ratio) -1
0
1 at 281.214 kb on + strand, within GFF2759 at 281.410 kb on - strand at 281.414 kb on - strand at 281.444 kb on + strand at 281.444 kb on + strand at 281.914 kb on + strand, within GFF2760 at 281.915 kb on - strand, within GFF2760 at 281.915 kb on - strand, within GFF2760 at 281.915 kb on - strand, within GFF2760 at 281.981 kb on - strand, within GFF2760 at 282.334 kb on + strand, within GFF2761 at 282.338 kb on + strand, within GFF2761 at 282.445 kb on + strand, within GFF2761 at 282.523 kb on + strand, within GFF2761 at 282.625 kb on + strand, within GFF2761 at 282.874 kb on - strand, within GFF2761 at 283.084 kb on + strand, within GFF2761 at 283.274 kb on + strand, within GFF2761 at 283.388 kb on - strand, within GFF2761 at 283.465 kb on - strand, within GFF2761 at 283.554 kb on + strand at 283.580 kb on + strand at 283.608 kb on - strand at 283.625 kb on + strand at 283.701 kb on - strand at 283.732 kb on + strand at 283.751 kb on + strand at 283.792 kb on - strand at 283.794 kb on + strand at 283.794 kb on + strand at 283.812 kb on - strand at 283.876 kb on + strand at 283.916 kb on + strand at 283.921 kb on + strand at 283.938 kb on + strand at 283.939 kb on - strand at 284.359 kb on - strand, within GFF2762 at 284.404 kb on + strand, within GFF2762 at 284.476 kb on + strand, within GFF2762 at 284.629 kb on - strand, within GFF2762
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer remove 281,214 + GFF2759 0.66 +0.6 281,410 - +0.1 281,414 - +0.3 281,444 + -0.2 281,444 + +0.1 281,914 + GFF2760 0.66 -0.3 281,915 - GFF2760 0.66 +0.2 281,915 - GFF2760 0.66 +0.2 281,915 - GFF2760 0.66 -0.0 281,981 - GFF2760 0.76 -0.4 282,334 + GFF2761 0.12 -0.2 282,338 + GFF2761 0.12 -0.0 282,445 + GFF2761 0.19 -0.4 282,523 + GFF2761 0.24 -0.2 282,625 + GFF2761 0.31 -0.1 282,874 - GFF2761 0.47 -0.1 283,084 + GFF2761 0.61 -0.6 283,274 + GFF2761 0.73 +0.1 283,388 - GFF2761 0.81 +0.2 283,465 - GFF2761 0.86 -1.2 283,554 + -0.7 283,580 + +1.4 283,608 - +0.1 283,625 + -0.0 283,701 - +1.0 283,732 + +0.8 283,751 + -0.6 283,792 - +0.8 283,794 + -0.1 283,794 + +0.7 283,812 - +0.8 283,876 + +0.0 283,916 + +0.3 283,921 + -0.0 283,938 + +0.8 283,939 - +0.3 284,359 - GFF2762 0.18 +0.1 284,404 + GFF2762 0.19 +0.2 284,476 + GFF2762 0.21 +0.3 284,629 - GFF2762 0.25 +0.7
Or see this region's nucleotide sequence