Experiment: LB_plus_SM_buffer
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2612 and GFF2613 are separated by 255 nucleotides GFF2613 and GFF2614 are separated by 48 nucleotides
GFF2612 - Glucans biosynthesis protein D precursor, at 135,445 to 137,064
GFF2612
GFF2613 - Putative esterase, at 137,320 to 138,828
GFF2613
GFF2614 - FIG074102: hypothetical protein, at 138,877 to 140,220
GFF2614
Position (kb) 137
138
139 Strain fitness (log2 ratio) -2
-1
0
1 at 136.419 kb on + strand, within GFF2612 at 136.490 kb on + strand, within GFF2612 at 136.491 kb on - strand, within GFF2612 at 136.494 kb on + strand, within GFF2612 at 136.495 kb on - strand, within GFF2612 at 136.499 kb on - strand, within GFF2612 at 136.532 kb on + strand, within GFF2612 at 136.533 kb on - strand, within GFF2612 at 136.537 kb on - strand, within GFF2612 at 136.537 kb on - strand, within GFF2612 at 136.609 kb on - strand, within GFF2612 at 136.609 kb on - strand, within GFF2612 at 136.735 kb on - strand, within GFF2612 at 136.858 kb on - strand, within GFF2612 at 137.083 kb on - strand at 137.101 kb on - strand at 137.101 kb on - strand at 137.331 kb on + strand at 137.570 kb on + strand, within GFF2613 at 137.601 kb on + strand, within GFF2613 at 137.612 kb on + strand, within GFF2613 at 137.656 kb on - strand, within GFF2613 at 137.675 kb on + strand, within GFF2613 at 137.676 kb on - strand, within GFF2613 at 137.735 kb on + strand, within GFF2613 at 137.749 kb on - strand, within GFF2613 at 137.752 kb on + strand, within GFF2613 at 137.752 kb on + strand, within GFF2613 at 137.752 kb on + strand, within GFF2613 at 137.753 kb on - strand, within GFF2613 at 137.753 kb on - strand, within GFF2613 at 137.753 kb on - strand, within GFF2613 at 137.780 kb on - strand, within GFF2613 at 138.160 kb on - strand, within GFF2613 at 138.256 kb on + strand, within GFF2613 at 138.351 kb on + strand, within GFF2613 at 138.351 kb on + strand, within GFF2613 at 138.351 kb on + strand, within GFF2613 at 138.567 kb on - strand, within GFF2613 at 138.624 kb on + strand, within GFF2613 at 138.739 kb on + strand at 138.740 kb on - strand at 138.923 kb on + strand at 138.923 kb on + strand at 139.067 kb on + strand, within GFF2614 at 139.068 kb on - strand, within GFF2614 at 139.307 kb on - strand, within GFF2614 at 139.592 kb on - strand, within GFF2614 at 139.592 kb on - strand, within GFF2614 at 139.638 kb on + strand, within GFF2614
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer remove 136,419 + GFF2612 0.60 -0.1 136,490 + GFF2612 0.65 +0.7 136,491 - GFF2612 0.65 +0.8 136,494 + GFF2612 0.65 -0.9 136,495 - GFF2612 0.65 +0.5 136,499 - GFF2612 0.65 -0.1 136,532 + GFF2612 0.67 +0.1 136,533 - GFF2612 0.67 +0.2 136,537 - GFF2612 0.67 +0.4 136,537 - GFF2612 0.67 +0.5 136,609 - GFF2612 0.72 +0.4 136,609 - GFF2612 0.72 -0.2 136,735 - GFF2612 0.80 +1.2 136,858 - GFF2612 0.87 +0.2 137,083 - -0.1 137,101 - +0.7 137,101 - +1.6 137,331 + +0.0 137,570 + GFF2613 0.17 -0.1 137,601 + GFF2613 0.19 -1.8 137,612 + GFF2613 0.19 +0.4 137,656 - GFF2613 0.22 +1.0 137,675 + GFF2613 0.24 +0.7 137,676 - GFF2613 0.24 -0.0 137,735 + GFF2613 0.28 -0.2 137,749 - GFF2613 0.28 +1.5 137,752 + GFF2613 0.29 +1.0 137,752 + GFF2613 0.29 -0.1 137,752 + GFF2613 0.29 -0.0 137,753 - GFF2613 0.29 +0.1 137,753 - GFF2613 0.29 +0.1 137,753 - GFF2613 0.29 +0.2 137,780 - GFF2613 0.30 +1.3 138,160 - GFF2613 0.56 +1.4 138,256 + GFF2613 0.62 +0.4 138,351 + GFF2613 0.68 -1.0 138,351 + GFF2613 0.68 -0.1 138,351 + GFF2613 0.68 +0.4 138,567 - GFF2613 0.83 +0.2 138,624 + GFF2613 0.86 +1.0 138,739 + -0.0 138,740 - +0.1 138,923 + -0.1 138,923 + -0.9 139,067 + GFF2614 0.14 +0.0 139,068 - GFF2614 0.14 -0.2 139,307 - GFF2614 0.32 -0.2 139,592 - GFF2614 0.53 +0.6 139,592 - GFF2614 0.53 -0.0 139,638 + GFF2614 0.57 +0.1
Or see this region's nucleotide sequence