Experiment: LB_plus_SM_buffer
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt GFF2596 and GFF2597 are separated by 53 nucleotides GFF2597 and GFF2598 are separated by 155 nucleotides GFF2598 and GFF2599 overlap by 14 nucleotides
GFF2596 - Benzoate transport protein, at 121,924 to 123,102
GFF2596
GFF2597 - Uncharacterized membrane lipoprotein clustered with tellurite resistance proteins TehA/TehB, at 123,156 to 123,824
GFF2597
GFF2598 - Tellurite resistance protein TehB, at 123,980 to 124,576
GFF2598
GFF2599 - Tellurite resistance protein TehA, at 124,563 to 125,576
GFF2599
Position (kb) 123
124 Strain fitness (log2 ratio) -1
0
1 at 122.169 kb on - strand, within GFF2596 at 122.279 kb on + strand, within GFF2596 at 122.710 kb on + strand, within GFF2596 at 122.711 kb on - strand, within GFF2596 at 122.910 kb on - strand, within GFF2596 at 122.910 kb on - strand, within GFF2596 at 122.932 kb on + strand, within GFF2596 at 123.065 kb on + strand at 123.066 kb on - strand at 123.279 kb on + strand, within GFF2597 at 123.313 kb on - strand, within GFF2597 at 123.410 kb on - strand, within GFF2597 at 123.537 kb on - strand, within GFF2597 at 123.632 kb on - strand, within GFF2597 at 123.737 kb on + strand, within GFF2597 at 123.803 kb on + strand at 123.818 kb on + strand at 124.006 kb on + strand at 124.074 kb on + strand, within GFF2598 at 124.098 kb on + strand, within GFF2598 at 124.166 kb on - strand, within GFF2598 at 124.343 kb on - strand, within GFF2598 at 124.385 kb on - strand, within GFF2598 at 124.445 kb on - strand, within GFF2598 at 124.466 kb on + strand, within GFF2598 at 124.653 kb on - strand at 124.818 kb on + strand, within GFF2599
Per-strain Table
Position Strand Gene LocusTag Fraction LB_plus_SM_buffer remove 122,169 - GFF2596 0.21 +0.7 122,279 + GFF2596 0.30 +0.2 122,710 + GFF2596 0.67 +0.1 122,711 - GFF2596 0.67 -0.3 122,910 - GFF2596 0.84 -0.2 122,910 - GFF2596 0.84 +0.3 122,932 + GFF2596 0.85 +0.1 123,065 + -0.4 123,066 - -0.1 123,279 + GFF2597 0.18 +0.0 123,313 - GFF2597 0.23 +0.6 123,410 - GFF2597 0.38 +0.4 123,537 - GFF2597 0.57 +0.1 123,632 - GFF2597 0.71 -0.4 123,737 + GFF2597 0.87 +0.6 123,803 + -0.2 123,818 + -0.3 124,006 + +0.0 124,074 + GFF2598 0.16 +0.8 124,098 + GFF2598 0.20 -0.8 124,166 - GFF2598 0.31 +0.0 124,343 - GFF2598 0.61 +0.9 124,385 - GFF2598 0.68 +0.0 124,445 - GFF2598 0.78 -0.7 124,466 + GFF2598 0.81 -0.3 124,653 - +0.6 124,818 + GFF2599 0.25 +0.0
Or see this region's nucleotide sequence