Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4674

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
5,595,288	-		Echvi_4673	0.40	+0.4
5,595,293	+		Echvi_4673	0.40	-2.1
5,595,293	+		Echvi_4673	0.40	+0.8
5,595,293	+		Echvi_4673	0.40	+1.2
5,595,294	-		Echvi_4673	0.40	+0.4
5,595,486	+		Echvi_4673	0.53	-0.5
5,595,487	-		Echvi_4673	0.53	-1.9
5,595,487	-		Echvi_4673	0.53	-0.5
5,595,487	-		Echvi_4673	0.53	+0.0
5,595,487	-		Echvi_4673	0.53	+0.2
5,595,652	+		Echvi_4673	0.65	+0.3
5,595,659	+		Echvi_4673	0.65	+0.1
5,595,659	+		Echvi_4673	0.65	+1.1
5,595,660	-		Echvi_4673	0.65	-0.3
5,595,767	-		Echvi_4673	0.73	+0.5
5,595,767	-		Echvi_4673	0.73	+1.2
5,595,771	+		Echvi_4673	0.73	-0.7
5,595,772	-		Echvi_4673	0.73	+0.5
5,595,777	+		Echvi_4673	0.73	+0.3
5,595,804	+		Echvi_4673	0.75	-0.1
5,595,805	-		Echvi_4673	0.75	-0.7
5,595,960	+		Echvi_4673	0.86	-0.1
5,595,960	+		Echvi_4673	0.86	+0.3
5,595,961	-		Echvi_4673	0.86	-1.1
5,595,961	-		Echvi_4673	0.86	+0.0
5,595,961	-		Echvi_4673	0.86	+1.4
5,595,993	+		Echvi_4673	0.88	-0.4
5,595,994	-		Echvi_4673	0.88	+0.4
5,595,994	-		Echvi_4673	0.88	-0.8
5,596,025	+				+0.4
5,596,026	-				-0.7
5,596,040	-				-0.1
5,596,092	+				-0.7
5,596,139	-				+0.6
5,596,152	+				+1.3
5,596,153	-				-1.9
5,596,153	-				+0.5
5,596,171	-				-0.2
5,596,176	-				-0.2
5,596,261	+				-0.2
5,596,386	+		Echvi_4674	0.30	-0.1
5,596,387	-		Echvi_4674	0.30	-1.1
5,596,575	-		Echvi_4674	0.75	-0.6
5,596,726	+				+0.8
5,596,727	-				+0.2
5,596,738	-				+0.2
5,596,768	-				+0.0
5,596,772	+				-0.6
5,596,773	-				-1.5
5,596,773	-				+0.5
5,596,773	-				-1.2
5,596,776	+				-1.2
5,596,777	-				+0.6
5,596,796	-				-0.7
5,596,796	-				-0.8
5,596,796	-				+0.2
5,596,821	+				-0.2
5,596,825	+				-0.7
5,596,825	+				+1.1
5,596,825	+				+0.1
5,596,825	+				-0.5
5,596,873	+				-1.2
5,596,873	+				+0.0
5,596,884	+				-0.5
5,596,884	+				+0.1
5,596,885	-				-0.7
5,596,885	-				-0.1
5,596,886	+				+0.1
5,596,886	+				-0.6
5,596,886	+				-1.8
5,596,886	+				-0.2
5,596,886	+				+0.4
5,596,886	+				+2.4
5,596,886	+				-1.4
5,596,887	-				+1.6
5,596,887	-				+1.8
5,596,887	-				+0.7
5,596,887	-				-1.0
5,596,887	-				-0.5
5,596,887	-				-0.3
5,596,887	-				+1.0
5,596,890	+				+0.8
5,596,890	+				+1.4
5,596,891	-				-1.0
5,596,941	+		Echvi_4675	0.13	+1.8
5,596,941	+		Echvi_4675	0.13	+0.1
5,596,941	+		Echvi_4675	0.13	-1.7
5,596,941	+		Echvi_4675	0.13	+0.8
5,596,942	-		Echvi_4675	0.13	-0.3
5,596,942	-		Echvi_4675	0.13	-1.2
5,596,942	-		Echvi_4675	0.13	+0.6
5,596,942	-		Echvi_4675	0.13	-0.3
5,596,942	-		Echvi_4675	0.13	-0.0
5,597,075	+		Echvi_4675	0.23	+0.7
5,597,145	+		Echvi_4675	0.29	-1.0
5,597,145	+		Echvi_4675	0.29	+0.3
5,597,145	+		Echvi_4675	0.29	+0.2
5,597,145	+		Echvi_4675	0.29	-1.2
5,597,145	+		Echvi_4675	0.29	-0.3
5,597,146	-		Echvi_4675	0.29	+0.8
5,597,147	+		Echvi_4675	0.29	-0.9
5,597,230	-		Echvi_4675	0.36	+1.0
5,597,260	-		Echvi_4675	0.38	-1.5
5,597,260	-		Echvi_4675	0.38	+1.8
5,597,262	+		Echvi_4675	0.38	+0.2
5,597,262	+		Echvi_4675	0.38	+0.3
5,597,264	+		Echvi_4675	0.38	-0.0
5,597,264	+		Echvi_4675	0.38	+0.8
5,597,265	-		Echvi_4675	0.39	+0.1
5,597,265	-		Echvi_4675	0.39	-0.9
5,597,265	-		Echvi_4675	0.39	+1.3
5,597,265	-		Echvi_4675	0.39	+0.1
5,597,265	-		Echvi_4675	0.39	-0.4
5,597,265	-		Echvi_4675	0.39	+0.0
5,597,270	+				+2.3
5,597,271	-		Echvi_4675	0.39	+0.3
5,597,321	-		Echvi_4675	0.43	+0.7
5,597,321	-		Echvi_4675	0.43	-0.4
5,597,321	-		Echvi_4675	0.43	+0.8
5,597,377	-		Echvi_4675	0.47	+0.3
5,597,427	+		Echvi_4675	0.51	-1.6
5,597,519	-		Echvi_4675	0.59	-0.5
5,597,634	-		Echvi_4675	0.68	+0.2
5,597,668	-		Echvi_4675	0.71	+0.3