Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4647

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
5,560,664	+		Echvi_4646	0.39	-1.7
5,560,664	+		Echvi_4646	0.39	+0.6
5,560,665	-		Echvi_4646	0.39	+1.8
5,560,670	+		Echvi_4646	0.39	+0.0
5,560,670	+		Echvi_4646	0.39	+1.4
5,560,702	+		Echvi_4646	0.41	+0.0
5,560,702	+		Echvi_4646	0.41	+0.2
5,560,703	-		Echvi_4646	0.41	-1.7
5,560,929	+		Echvi_4646	0.56	+1.4
5,560,930	-		Echvi_4646	0.56	-0.2
5,560,990	+		Echvi_4646	0.60	-0.2
5,560,991	-		Echvi_4646	0.60	-1.7
5,560,994	+		Echvi_4646	0.60	-1.1
5,561,051	-		Echvi_4646	0.64	+3.3
5,561,132	+		Echvi_4646	0.70	-0.2
5,561,143	+		Echvi_4646	0.70	-0.5
5,561,146	+		Echvi_4646	0.70	+0.7
5,561,147	-		Echvi_4646	0.71	-0.9
5,561,147	-		Echvi_4646	0.71	-0.6
5,561,167	+		Echvi_4646	0.72	-0.7
5,561,313	+		Echvi_4646	0.81	+1.8
5,561,313	+		Echvi_4646	0.81	+1.2
5,561,314	-		Echvi_4646	0.82	-0.3
5,561,346	+		Echvi_4646	0.84	-0.9
5,561,346	+		Echvi_4646	0.84	-1.7
5,561,383	-		Echvi_4646	0.86	-0.2
5,561,383	-		Echvi_4646	0.86	+0.4
5,561,402	-		Echvi_4646	0.87	-1.1
5,561,413	+		Echvi_4646	0.88	-0.2
5,561,440	+		Echvi_4646	0.90	+0.8
5,561,441	-		Echvi_4646	0.90	+0.5
5,561,464	+				-0.9
5,561,464	+				-0.5
5,561,509	-				-0.3
5,561,523	+				+0.2
5,561,524	-				+1.6
5,561,571	+				-0.0
5,561,572	-				-0.6
5,561,572	-				-0.0
5,561,576	+				-0.4
5,561,576	+				+1.6
5,561,577	-				-0.9
5,561,577	-				+0.7
5,561,579	-				+0.1
5,561,579	-				+0.3
5,561,579	-				-0.7
5,561,579	-				+1.8
5,561,579	-				+0.3
5,561,586	-				-0.2
5,561,608	+				+0.0
5,561,608	+				-0.3
5,561,611	+				+0.2
5,561,627	+				+0.5
5,561,742	+				+2.6
5,561,778	+				-1.5
5,561,778	+				+0.0
5,561,779	-				+0.5
5,561,795	+				+0.2
5,561,795	+				+0.1
5,561,797	+				+0.1
5,561,811	-				-1.2
5,561,839	+				+0.7
5,561,839	+				-0.3
5,561,839	+				-0.2
5,561,840	-				+0.0
5,561,840	-				-1.6
5,561,842	-				+0.3
5,561,871	+				-0.4
5,561,956	+		Echvi_4647	0.11	-0.1
5,562,042	+		Echvi_4647	0.14	+3.1
5,562,042	+		Echvi_4647	0.14	-0.8
5,562,043	-		Echvi_4647	0.14	-0.5
5,562,044	+		Echvi_4647	0.14	+0.3
5,562,044	+		Echvi_4647	0.14	-0.5
5,562,044	+		Echvi_4647	0.14	+0.4
5,562,045	-		Echvi_4647	0.14	+2.3
5,562,045	-		Echvi_4647	0.14	+0.3
5,562,081	-		Echvi_4647	0.15	+0.8
5,562,081	-		Echvi_4647	0.15	+0.4
5,562,121	-		Echvi_4647	0.16	+1.5
5,562,136	+		Echvi_4647	0.17	+0.3
5,562,136	+		Echvi_4647	0.17	-0.6
5,562,136	+		Echvi_4647	0.17	-1.3
5,562,136	+		Echvi_4647	0.17	-0.2
5,562,138	+		Echvi_4647	0.17	+0.5
5,562,138	+		Echvi_4647	0.17	-2.9
5,562,138	+		Echvi_4647	0.17	-1.1
5,562,138	+		Echvi_4647	0.17	-1.6
5,562,138	+		Echvi_4647	0.17	+0.7
5,562,139	-		Echvi_4647	0.17	+1.0
5,562,139	-		Echvi_4647	0.17	+1.2
5,562,139	-		Echvi_4647	0.17	-0.7
5,562,139	-		Echvi_4647	0.17	-2.0
5,562,298	+		Echvi_4647	0.22	-0.2
5,562,299	-		Echvi_4647	0.22	-1.2
5,562,312	+		Echvi_4647	0.23	-0.1
5,562,312	+		Echvi_4647	0.23	-1.3
5,562,312	+		Echvi_4647	0.23	-0.9
5,562,313	-		Echvi_4647	0.23	+0.2
5,562,313	-		Echvi_4647	0.23	-0.3
5,562,313	-		Echvi_4647	0.23	-0.8
5,562,397	+		Echvi_4647	0.25	+0.1
5,562,398	-		Echvi_4647	0.26	+0.4
5,562,400	+		Echvi_4647	0.26	+2.0
5,562,401	-		Echvi_4647	0.26	+0.2
5,562,401	-		Echvi_4647	0.26	+0.6
5,562,512	+		Echvi_4647	0.29	+0.7
5,562,577	+		Echvi_4647	0.31	+1.4
5,562,619	+		Echvi_4647	0.33	-0.2
5,562,620	-		Echvi_4647	0.33	+0.5
5,562,709	-		Echvi_4647	0.36	+0.6
5,562,716	-		Echvi_4647	0.36	+0.0
5,562,740	+		Echvi_4647	0.37	+0.8
5,562,740	+		Echvi_4647	0.37	+0.6
5,562,740	+		Echvi_4647	0.37	+0.5
5,562,740	+		Echvi_4647	0.37	+1.7
5,562,740	+		Echvi_4647	0.37	-0.3
5,562,740	+		Echvi_4647	0.37	+2.3
5,562,740	+		Echvi_4647	0.37	+0.2
5,562,741	-		Echvi_4647	0.37	+1.3
5,562,741	-		Echvi_4647	0.37	+1.2
5,562,741	-		Echvi_4647	0.37	+0.4
5,562,741	-		Echvi_4647	0.37	-0.1
5,562,741	-		Echvi_4647	0.37	+0.4
5,562,741	-		Echvi_4647	0.37	+0.8
5,562,744	+		Echvi_4647	0.37	-1.2
5,562,744	+		Echvi_4647	0.37	-0.8
5,562,744	+		Echvi_4647	0.37	+0.8
5,562,744	+		Echvi_4647	0.37	-1.1
5,562,744	+		Echvi_4647	0.37	+1.4
5,562,745	-		Echvi_4647	0.37	-0.7
5,562,745	-		Echvi_4647	0.37	-0.2
5,562,745	-		Echvi_4647	0.37	-0.1
5,562,745	-		Echvi_4647	0.37	-0.0
5,562,745	-		Echvi_4647	0.37	+0.3
5,562,745	-		Echvi_4647	0.37	-0.3
5,562,946	+		Echvi_4647	0.43	-0.9
5,562,946	+		Echvi_4647	0.43	+1.7
5,562,948	+		Echvi_4647	0.44	-0.5
5,562,954	+		Echvi_4647	0.44	-0.6
5,562,954	+		Echvi_4647	0.44	+0.1
5,563,031	+		Echvi_4647	0.46	-0.2
5,563,031	+		Echvi_4647	0.46	+0.4
5,563,169	-		Echvi_4647	0.51	-0.6
5,563,186	-		Echvi_4647	0.51	-0.4
5,563,218	-		Echvi_4647	0.52	-0.9
5,563,218	-		Echvi_4647	0.52	+0.0
5,563,228	+		Echvi_4647	0.53	-0.5
5,563,258	-		Echvi_4647	0.54	-1.3
5,563,258	-		Echvi_4647	0.54	-1.2
5,563,279	+		Echvi_4647	0.54	+1.1
5,563,304	-		Echvi_4647	0.55	-0.7
5,563,306	-		Echvi_4647	0.55	+0.5
5,563,337	-		Echvi_4647	0.56	+0.1
5,563,338	+		Echvi_4647	0.56	-0.7
5,563,339	-		Echvi_4647	0.56	-1.0
5,563,435	+		Echvi_4647	0.59	+0.1
5,563,477	+		Echvi_4647	0.61	+2.1
5,563,479	+		Echvi_4647	0.61	-2.3
5,563,479	+		Echvi_4647	0.61	+1.4
5,563,479	+		Echvi_4647	0.61	-0.3
5,563,480	-		Echvi_4647	0.61	-0.2
5,563,480	-		Echvi_4647	0.61	-0.4
5,563,498	+		Echvi_4647	0.61	-0.2
5,563,498	+		Echvi_4647	0.61	-0.5
5,563,498	+		Echvi_4647	0.61	-1.8
5,563,498	+		Echvi_4647	0.61	+0.3
5,563,498	+		Echvi_4647	0.61	+0.2
5,563,499	-		Echvi_4647	0.62	+0.4
5,563,499	-		Echvi_4647	0.62	-0.7
5,563,550	-		Echvi_4647	0.63	-1.0
5,563,550	-		Echvi_4647	0.63	-0.3
5,563,552	-		Echvi_4647	0.63	+0.8
5,563,552	-		Echvi_4647	0.63	-0.4
5,563,562	-		Echvi_4647	0.64	-0.8
5,563,607	-		Echvi_4647	0.65	+0.5
5,563,668	+		Echvi_4647	0.67	+0.2
5,563,682	-		Echvi_4647	0.68	+0.6
5,563,682	-		Echvi_4647	0.68	-0.2
5,563,686	+		Echvi_4647	0.68	+2.4
5,563,686	+		Echvi_4647	0.68	-1.0
5,563,686	+		Echvi_4647	0.68	-0.7
5,563,687	-		Echvi_4647	0.68	+1.7
5,563,687	-		Echvi_4647	0.68	-0.2
5,563,687	-		Echvi_4647	0.68	+1.4
5,563,687	-		Echvi_4647	0.68	-1.0
5,563,688	+		Echvi_4647	0.68	+1.8
5,563,688	+		Echvi_4647	0.68	+2.2
5,563,723	+		Echvi_4647	0.69	-0.2
5,563,725	+		Echvi_4647	0.69	-0.1
5,563,726	-		Echvi_4647	0.69	-2.6
5,563,868	+		Echvi_4647	0.74	-1.2
5,563,911	+		Echvi_4647	0.75	+0.8
5,563,948	+		Echvi_4647	0.76	+0.8
5,563,973	+		Echvi_4647	0.77	+0.3
5,563,974	-		Echvi_4647	0.77	-0.2
5,564,097	+		Echvi_4647	0.81	-0.0
5,564,097	+		Echvi_4647	0.81	+1.5
5,564,097	+		Echvi_4647	0.81	-1.3
5,564,097	+		Echvi_4647	0.81	-2.6
5,564,097	+		Echvi_4647	0.81	-0.2
5,564,098	-		Echvi_4647	0.81	-0.1
5,564,098	-		Echvi_4647	0.81	-0.8
5,564,098	-		Echvi_4647	0.81	-1.1
5,564,100	-		Echvi_4647	0.81	+0.8
5,564,111	-		Echvi_4647	0.82	+0.8
5,564,113	+		Echvi_4647	0.82	-0.3
5,564,127	-		Echvi_4647	0.82	-0.4
5,564,189	-		Echvi_4647	0.84	+0.2
5,564,189	-		Echvi_4647	0.84	-1.7
5,564,301	+		Echvi_4647	0.88	-2.1
5,564,356	+		Echvi_4647	0.90	-0.0
5,564,356	+		Echvi_4647	0.90	-0.4
5,564,356	+		Echvi_4647	0.90	+0.4
5,564,356	+		Echvi_4647	0.90	+0.6
5,564,357	-		Echvi_4647	0.90	+0.5
5,564,375	+				+0.6
5,564,375	+				-0.3
5,564,375	+				-0.7
5,564,376	-				-1.0
5,564,392	+				-3.0
5,564,446	+				+1.1
5,564,450	-				-0.6
5,564,450	-				+0.5
5,564,489	-				+0.4
5,564,496	-				-0.2
5,564,606	+				-0.6
5,564,607	-				+0.0
5,564,607	-				+0.8
5,564,662	+				-0.0
5,564,662	+				+0.2
5,564,663	-				-0.3
5,564,663	-				+0.5
5,564,663	-				-0.1
5,564,730	+				-0.5
5,564,731	-				-1.0
5,564,733	+				-1.4
5,564,837	+				-0.2
5,564,838	-				+0.7
5,564,877	+				-1.9
5,564,877	+				-0.8
5,564,878	-				+0.7
5,564,887	-				+0.7
5,564,942	+				+0.2
5,564,973	-				-0.9
5,564,976	+				-1.0
5,564,976	+				-1.0
5,564,977	-				+1.2
5,565,001	+				+0.5
5,565,002	-				+0.5
5,565,179	+				-0.7
5,565,180	-				+1.0
5,565,180	-				+0.1
5,565,180	-				+0.2
5,565,180	-				-0.1
5,565,188	+				+0.3
5,565,188	+				-0.2
5,565,188	+				-0.6
5,565,188	+				-1.0
5,565,188	+				+1.1
5,565,188	+				+0.9
5,565,188	+				+0.8
5,565,189	-		Echvi_4648	0.10	+0.8
5,565,189	-		Echvi_4648	0.10	+2.3
5,565,189	-		Echvi_4648	0.10	-0.6
5,565,194	+		Echvi_4648	0.11	-0.4
5,565,195	-		Echvi_4648	0.11	+0.5
5,565,195	-		Echvi_4648	0.11	-1.0
5,565,221	+		Echvi_4648	0.16	-0.6
5,565,251	+		Echvi_4648	0.22	+2.2
5,565,252	-		Echvi_4648	0.22	+3.2
5,565,435	-		Echvi_4648	0.55	-0.8
5,565,435	-		Echvi_4648	0.55	+2.0
5,565,446	+		Echvi_4648	0.57	-0.9
5,565,446	+		Echvi_4648	0.57	+0.2
5,565,447	-		Echvi_4648	0.58	+1.0
5,565,468	+		Echvi_4648	0.62	+2.3
5,565,537	+		Echvi_4648	0.74	-0.1
5,565,538	-		Echvi_4648	0.74	+0.8
5,565,538	-		Echvi_4648	0.74	+1.1
5,565,539	+		Echvi_4648	0.75	+0.0
5,565,540	-		Echvi_4648	0.75	+0.0
5,565,549	+		Echvi_4648	0.76	+0.5
5,565,549	+		Echvi_4648	0.76	-0.0
5,565,549	+		Echvi_4648	0.76	+0.6
5,565,550	-		Echvi_4648	0.77	+1.8
5,565,550	-		Echvi_4648	0.77	-0.2
5,565,618	+		Echvi_4648	0.89	-0.0
5,565,618	+		Echvi_4648	0.89	-0.7
5,565,619	-		Echvi_4648	0.89	+0.8
5,565,619	-		Echvi_4648	0.89	+2.4
5,565,619	-		Echvi_4648	0.89	-0.5
5,565,641	+				+0.5
5,565,641	+				+0.1
5,565,641	+				-0.6
5,565,642	-				-0.7
5,565,652	+				-0.9
5,565,653	-				+1.4
5,565,653	-				-0.4