Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4633

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
5,541,958	-		Echvi_4631	0.78	-0.2
5,542,182	+		Echvi_4631	0.88	-0.5
5,542,224	+		Echvi_4631	0.90	-0.5
5,542,224	+		Echvi_4631	0.90	-1.6
5,542,227	+		Echvi_4631	0.90	+1.3
5,542,228	-				+2.8
5,542,277	+				-1.0
5,542,277	+				-0.6
5,542,281	+				-1.5
5,542,281	+				+1.4
5,542,283	+				-0.6
5,542,283	+				-1.3
5,542,284	-				+0.4
5,542,432	+				+1.3
5,542,432	+				-1.3
5,542,444	+				-0.8
5,542,455	+				-0.2
5,542,455	+				+0.3
5,542,461	+				-0.2
5,542,461	+				+0.3
5,542,462	-				+0.8
5,542,462	-				-0.3
5,542,462	-				+0.4
5,542,464	+				-0.2
5,542,465	-				-0.2
5,542,504	-				-0.2
5,542,507	+				+0.4
5,542,507	+				-1.5
5,542,507	+				-3.6
5,542,508	-				+0.0
5,542,825	-				-0.3
5,542,874	+				-0.7
5,542,875	-				-1.9
5,542,966	+				-1.5
5,543,022	+				-1.6
5,543,022	+				-0.7
5,543,056	-				-0.4
5,543,184	+		Echvi_4633	0.17	-1.0
5,543,185	-		Echvi_4633	0.17	+0.3
5,543,186	+		Echvi_4633	0.18	-1.3
5,543,187	-		Echvi_4633	0.18	-0.5
5,543,249	+		Echvi_4633	0.22	-0.9
5,543,250	-		Echvi_4633	0.22	-0.5
5,543,288	+		Echvi_4633	0.25	+0.2
5,543,288	+		Echvi_4633	0.25	-0.7
5,543,289	-		Echvi_4633	0.25	-0.2
5,543,293	+		Echvi_4633	0.26	-2.7
5,543,294	-		Echvi_4633	0.26	-0.5
5,543,399	-		Echvi_4633	0.34	-0.9
5,543,434	+		Echvi_4633	0.36	-0.2
5,543,435	-		Echvi_4633	0.36	-0.8
5,543,435	-		Echvi_4633	0.36	-1.0
5,543,705	+		Echvi_4633	0.57	-1.0
5,543,807	+		Echvi_4633	0.64	+0.3
5,543,869	+		Echvi_4633	0.69	-0.7
5,543,869	+		Echvi_4633	0.69	-1.2
5,543,869	+		Echvi_4633	0.69	-0.0
5,543,869	+		Echvi_4633	0.69	+0.0
5,543,870	-		Echvi_4633	0.69	+0.7
5,543,957	+		Echvi_4633	0.76	-0.2
5,544,092	-		Echvi_4633	0.86	+0.1
5,544,135	+		Echvi_4633	0.89	-0.6
5,544,140	-		Echvi_4633	0.89	-0.5
5,544,147	-		Echvi_4633	0.90	+2.6
5,544,261	-				-1.2
5,544,279	+				-1.2