Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4582

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
5,487,074	+				-2.1
5,487,074	+				+2.6
5,487,074	+				+0.6
5,487,074	+				+0.7
5,487,075	-				+0.6
5,487,075	-				+0.6
5,487,078	+				-0.5
5,487,078	+				-0.9
5,487,078	+				+0.0
5,487,079	-				+1.8
5,487,079	-				-0.2
5,487,139	+		Echvi_4581	0.24	+1.0
5,487,170	+		Echvi_4581	0.34	+0.2
5,487,170	+		Echvi_4581	0.34	-0.4
5,487,171	-		Echvi_4581	0.34	+0.7
5,487,175	-		Echvi_4581	0.35	-0.3
5,487,197	+		Echvi_4581	0.42	+1.4
5,487,197	+		Echvi_4581	0.42	-0.2
5,487,198	-		Echvi_4581	0.42	-1.0
5,487,267	+		Echvi_4581	0.64	+0.2
5,487,310	+		Echvi_4581	0.77	-1.6
5,487,311	-		Echvi_4581	0.77	-0.7
5,487,351	+		Echvi_4581	0.90	-0.4
5,487,351	+		Echvi_4581	0.90	-1.2
5,487,352	-				+0.9
5,487,353	+				-0.3
5,487,353	+				+1.3
5,487,353	+				+0.2
5,487,353	+				-0.2
5,487,353	+				-1.7
5,487,353	+				-3.7
5,487,353	+				+0.1
5,487,353	+				-0.0
5,487,353	+				-1.0
5,487,353	+				+0.7
5,487,354	-				-0.5
5,487,354	-				+0.1
5,487,354	-				+1.1
5,487,354	-				+1.0
5,487,373	+				+0.0
5,487,384	+				-0.0
5,487,409	-				+0.0
5,487,434	-				-0.2
5,487,481	+				-1.2
5,487,565	-				+1.8
5,487,597	+				-0.5
5,487,610	-				-0.5
5,487,677	-				+0.3
5,487,731	+				-0.7
5,487,732	-				+0.6
5,487,772	+				+0.5
5,487,800	-				+0.7
5,487,804	+				-2.5
5,487,804	+				-0.3
5,487,823	-				-1.0
5,487,870	+				-0.5
5,487,870	+				-1.4
5,487,871	-				-0.6
5,487,885	+				+1.0
5,487,886	-				+0.2
5,487,903	+				-0.5
5,487,906	+				-0.2
5,487,906	+				-0.3
5,487,975	+				-1.6
5,487,975	+				-0.3
5,487,975	+				-0.8
5,488,019	-				+1.6
5,488,019	-				-0.0
5,488,019	-				+0.5
5,488,021	-				-0.2
5,488,251	-		Echvi_4582	0.49	-0.5
5,488,308	-		Echvi_4582	0.63	+0.3
5,488,308	-		Echvi_4582	0.63	-0.2
5,488,330	+		Echvi_4582	0.68	+0.5
5,488,392	+		Echvi_4582	0.83	-1.3
5,488,394	-		Echvi_4582	0.83	+0.7
5,488,465	+				+0.7
5,488,466	-				-1.0
5,488,466	-				-1.2
5,488,467	+				+0.2
5,488,530	+				-0.8
5,488,535	+				+0.5
5,488,536	-				-1.2
5,488,612	+				+0.7
5,488,678	+				-1.7
5,488,689	+				-1.3
5,488,689	+				+0.2
5,488,690	-				+0.8
5,488,690	-				-0.8
5,488,751	+				-0.5
5,488,751	+				-0.7
5,488,751	+				-0.6
5,488,776	-				+0.8
5,488,797	+				+0.1
5,488,797	+				+0.8
5,488,797	+				-0.7
5,488,797	+				-1.2
5,488,797	+				-2.0
5,488,797	+				-1.2
5,488,798	-				+0.0
5,488,798	-				-0.1
5,488,798	-				+0.7
5,488,798	-				+0.1
5,488,798	-				-1.9
5,488,800	-				+2.0
5,488,800	-				+0.1
5,488,801	+				-0.5
5,488,802	-				-0.2
5,488,927	+				-0.8
5,488,928	-				+0.4
5,488,950	-				+0.5
5,488,985	-				+0.5
5,489,040	-				-0.8
5,489,253	-				-0.1
5,489,321	+				-1.3
5,489,321	+				+0.8
5,489,322	-				-1.3
5,489,327	+				-0.2
5,489,328	-				-0.3
5,489,422	+				+0.1
5,489,424	+				+0.3
5,489,424	+				+0.4
5,489,425	-				-0.8