Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4563

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
5,459,852	-		Echvi_4561	0.49	+0.0
5,459,895	-		Echvi_4561	0.71	+0.4
5,459,922	+				+0.8
5,459,922	+				-0.4
5,459,923	-				-0.3
5,459,948	+				-0.2
5,459,948	+				-0.8
5,459,953	+				-0.4
5,459,953	+				-0.6
5,459,954	-				-1.0
5,459,954	-				+1.8
5,459,957	-				-0.3
5,460,076	+		Echvi_4562	0.24	+0.3
5,460,077	-		Echvi_4562	0.24	+1.1
5,460,347	+		Echvi_4562	0.60	-2.0
5,460,347	+		Echvi_4562	0.60	-0.6
5,460,348	-		Echvi_4562	0.61	+0.5
5,460,348	-		Echvi_4562	0.61	+4.4
5,460,410	-		Echvi_4562	0.69	+1.2
5,460,563	-		Echvi_4562	0.90	+0.0
5,460,623	-				-0.4
5,460,626	+				-0.3
5,460,627	-				-0.7
5,460,627	-				+0.0
5,460,638	-				+0.7
5,460,663	+				-1.5
5,460,664	-				+1.1
5,460,664	-				+1.2
5,460,705	+				+0.8
5,460,706	-				-1.0
5,460,720	+				-1.6
5,460,721	-				+0.5
5,460,753	+				+0.7
5,460,753	+				-0.7
5,460,753	+				+1.1
5,460,754	-				-1.2
5,460,854	+				+0.1
5,460,854	+				-0.3
5,460,916	+				+3.6
5,460,916	+				+1.3
5,460,916	+				-0.4
5,460,917	-				-0.5
5,460,917	-				+0.8
5,460,917	-				+0.6
5,461,120	+		Echvi_4563	0.16	-0.7
5,461,121	-		Echvi_4563	0.16	-0.0
5,461,139	+		Echvi_4563	0.18	-0.5
5,461,282	+		Echvi_4563	0.26	-1.1
5,461,294	+		Echvi_4563	0.27	-0.1
5,461,294	+		Echvi_4563	0.27	-0.2
5,461,295	-		Echvi_4563	0.27	-0.9
5,461,295	-		Echvi_4563	0.27	+0.7
5,461,295	-		Echvi_4563	0.27	-0.2
5,461,297	+		Echvi_4563	0.27	-1.0
5,461,297	+		Echvi_4563	0.27	-1.7
5,461,297	+		Echvi_4563	0.27	-0.0
5,461,313	+		Echvi_4563	0.28	+1.2
5,461,313	+		Echvi_4563	0.28	+0.3
5,461,384	+		Echvi_4563	0.32	+0.8
5,461,385	-		Echvi_4563	0.32	-0.2
5,461,388	+		Echvi_4563	0.32	-0.6
5,461,438	+		Echvi_4563	0.35	-0.7
5,461,594	+		Echvi_4563	0.45	-0.3
5,461,594	+		Echvi_4563	0.45	+0.0
5,461,594	+		Echvi_4563	0.45	+0.6
5,461,595	-		Echvi_4563	0.45	+0.2
5,461,637	+		Echvi_4563	0.47	-0.3
5,461,639	+		Echvi_4563	0.47	-0.9
5,461,639	+		Echvi_4563	0.47	+1.1
5,461,663	-		Echvi_4563	0.49	+0.6
5,461,674	+		Echvi_4563	0.50	+0.0
5,461,685	+		Echvi_4563	0.50	+0.6
5,461,686	-		Echvi_4563	0.50	-0.6
5,461,813	+		Echvi_4563	0.58	-1.3
5,461,813	+		Echvi_4563	0.58	+0.2
5,461,813	+		Echvi_4563	0.58	-0.2
5,461,814	-		Echvi_4563	0.58	+1.3
5,461,814	-		Echvi_4563	0.58	-1.3
5,461,960	+		Echvi_4563	0.67	-0.6
5,461,961	-		Echvi_4563	0.67	+1.5
5,461,963	+		Echvi_4563	0.67	-0.6
5,461,997	-		Echvi_4563	0.69	-0.0
5,462,011	+		Echvi_4563	0.70	+2.4
5,462,012	-		Echvi_4563	0.70	-1.1
5,462,117	+		Echvi_4563	0.76	-0.3
5,462,118	-		Echvi_4563	0.76	-1.6
5,462,118	-		Echvi_4563	0.76	-0.2
5,462,126	-		Echvi_4563	0.77	-1.0
5,462,126	-		Echvi_4563	0.77	-0.2
5,462,150	-		Echvi_4563	0.78	-0.2
5,462,254	+		Echvi_4563	0.84	-0.5
5,462,255	-		Echvi_4563	0.84	+1.1
5,462,255	-		Echvi_4563	0.84	+1.0
5,462,307	-		Echvi_4563	0.87	-1.2
5,462,345	+		Echvi_4563	0.90	-1.3
5,462,491	-				+0.0
5,462,544	-				-0.6
5,462,576	-				+0.8
5,462,624	-				+0.3
5,462,673	-				+0.8
5,462,788	+				+0.8
5,462,789	-				-0.9
5,462,791	+				-1.0
5,462,791	+				-0.9
5,462,792	-				-1.1
5,462,792	-				+1.6
5,462,855	+				+0.3
5,462,895	-		Echvi_4564	0.11	-1.0
5,462,899	+		Echvi_4564	0.11	+0.3
5,462,899	+		Echvi_4564	0.11	-2.0
5,462,899	+		Echvi_4564	0.11	-0.9
5,462,899	+		Echvi_4564	0.11	+0.3
5,462,900	-		Echvi_4564	0.11	+0.7
5,462,930	-		Echvi_4564	0.12	+0.6
5,462,930	-		Echvi_4564	0.12	-0.5
5,462,930	-		Echvi_4564	0.12	-1.3
5,462,943	-		Echvi_4564	0.12	-1.6
5,462,944	+		Echvi_4564	0.12	-0.0
5,463,105	+		Echvi_4564	0.17	+1.3
5,463,105	+		Echvi_4564	0.17	-1.0
5,463,105	+		Echvi_4564	0.17	-0.2
5,463,105	+		Echvi_4564	0.17	+0.7
5,463,105	+		Echvi_4564	0.17	-1.2
5,463,106	-		Echvi_4564	0.17	+0.2
5,463,106	-		Echvi_4564	0.17	-1.3
5,463,346	+		Echvi_4564	0.24	-0.4
5,463,449	-		Echvi_4564	0.27	+0.4
5,463,470	-		Echvi_4564	0.28	-0.5
5,463,470	-		Echvi_4564	0.28	-0.4
5,463,499	+		Echvi_4564	0.28	-0.7
5,463,500	-				+0.3
5,463,503	-		Echvi_4564	0.28	-0.2