Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4527

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
5,410,346	+		Echvi_4525	0.65	+0.6
5,410,346	+		Echvi_4525	0.65	+0.6
5,410,347	-		Echvi_4525	0.65	-0.2
5,410,348	+		Echvi_4525	0.65	-0.6
5,410,348	+		Echvi_4525	0.65	+1.1
5,410,348	+		Echvi_4525	0.65	+0.0
5,410,348	+		Echvi_4525	0.65	+1.5
5,410,348	+		Echvi_4525	0.65	-0.1
5,410,349	-		Echvi_4525	0.65	-0.1
5,410,349	-		Echvi_4525	0.65	+1.3
5,410,349	-		Echvi_4525	0.65	-1.1
5,410,349	-		Echvi_4525	0.65	-0.4
5,410,349	-		Echvi_4525	0.65	+0.1
5,410,349	-		Echvi_4525	0.65	+0.1
5,410,350	+		Echvi_4525	0.65	+0.9
5,410,350	+		Echvi_4525	0.65	-0.6
5,410,350	+		Echvi_4525	0.65	+0.4
5,410,350	+		Echvi_4525	0.65	-0.1
5,410,350	+		Echvi_4525	0.65	+0.2
5,410,350	+		Echvi_4525	0.65	+0.7
5,410,350	+		Echvi_4525	0.65	+1.3
5,410,350	+		Echvi_4525	0.65	-0.2
5,410,350	+		Echvi_4525	0.65	+0.0
5,410,350	+		Echvi_4525	0.65	-0.4
5,410,350	+		Echvi_4525	0.65	-1.0
5,410,350	+		Echvi_4525	0.65	+0.3
5,410,350	+		Echvi_4525	0.65	-0.1
5,410,350	+		Echvi_4525	0.65	-0.7
5,410,350	+		Echvi_4525	0.65	+0.9
5,410,350	+		Echvi_4525	0.65	+1.0
5,410,350	+		Echvi_4525	0.65	-1.5
5,410,350	+		Echvi_4525	0.65	-0.5
5,410,350	+		Echvi_4525	0.65	+1.6
5,410,350	+		Echvi_4525	0.65	+0.3
5,410,351	-		Echvi_4525	0.65	+0.5
5,410,351	-		Echvi_4525	0.65	-0.7
5,410,351	-		Echvi_4525	0.65	-0.8
5,410,351	-		Echvi_4525	0.65	+0.2
5,410,351	-		Echvi_4525	0.65	+0.1
5,410,351	-		Echvi_4525	0.65	-0.6
5,410,351	-		Echvi_4525	0.65	+0.2
5,410,351	-		Echvi_4525	0.65	-0.2
5,410,351	-		Echvi_4525	0.65	-1.0
5,410,351	-		Echvi_4525	0.65	-0.2
5,410,351	-		Echvi_4525	0.65	-2.4
5,410,351	-		Echvi_4525	0.65	-0.6
5,410,351	-		Echvi_4525	0.65	-0.0
5,410,354	+		Echvi_4525	0.66	+0.5
5,410,354	+		Echvi_4525	0.66	-0.1
5,410,354	+		Echvi_4525	0.66	-0.4
5,410,354	+		Echvi_4525	0.66	-0.8
5,410,354	+		Echvi_4525	0.66	+0.4
5,410,354	+		Echvi_4525	0.66	-0.2
5,410,354	+		Echvi_4525	0.66	-0.7
5,410,354	+		Echvi_4525	0.66	-1.0
5,410,354	+		Echvi_4525	0.66	-1.8
5,410,354	+		Echvi_4525	0.66	+0.2
5,410,355	-		Echvi_4525	0.66	+0.5
5,410,355	-		Echvi_4525	0.66	-2.4
5,410,355	-		Echvi_4525	0.66	+0.4
5,410,355	-		Echvi_4525	0.66	-0.3
5,410,355	-		Echvi_4525	0.66	+0.5
5,410,355	-		Echvi_4525	0.66	-2.2
5,410,355	-		Echvi_4525	0.66	-0.8
5,410,358	+		Echvi_4525	0.66	+0.4
5,410,358	+		Echvi_4525	0.66	-1.0
5,410,359	-		Echvi_4525	0.66	-1.0
5,410,359	-		Echvi_4525	0.66	-0.3
5,410,371	+		Echvi_4525	0.68	-0.5
5,410,397	+		Echvi_4525	0.71	-0.6
5,410,434	+		Echvi_4525	0.75	+0.8
5,410,511	+		Echvi_4525	0.84	+0.2
5,410,516	-		Echvi_4525	0.84	+0.9
5,410,516	-		Echvi_4525	0.84	+0.3
5,410,516	-		Echvi_4525	0.84	+0.7
5,410,524	+		Echvi_4525	0.85	-0.5
5,410,524	+		Echvi_4525	0.85	-0.5
5,410,542	-		Echvi_4525	0.87	-0.0
5,410,542	-		Echvi_4525	0.87	-0.3
5,410,550	-		Echvi_4525	0.88	+0.3
5,410,625	-				-0.1
5,410,629	+				+0.9
5,410,636	+				-1.1
5,410,636	+				-2.3
5,410,637	-				-0.3
5,410,640	+				-1.4
5,410,662	+				-0.1
5,410,666	+				-0.6
5,410,666	+				+0.4
5,410,669	+				-0.5
5,410,669	+				+2.4
5,410,669	+				+0.3
5,410,669	+				+1.0
5,410,797	+				-0.9
5,410,798	-				-2.0
5,410,857	+				+0.9
5,410,857	+				-0.3
5,410,858	-				-2.0
5,410,860	-				+1.9
5,410,891	-				-0.1
5,410,992	+		Echvi_4526	0.12	-0.0
5,411,013	+		Echvi_4526	0.18	+0.9
5,411,021	-		Echvi_4526	0.20	+1.1
5,411,031	+		Echvi_4526	0.23	+0.1
5,411,031	+		Echvi_4526	0.23	-0.6
5,411,031	+		Echvi_4526	0.23	+1.9
5,411,031	+		Echvi_4526	0.23	+0.5
5,411,031	+		Echvi_4526	0.23	-0.4
5,411,032	-		Echvi_4526	0.23	+0.6
5,411,032	-		Echvi_4526	0.23	+0.4
5,411,032	-		Echvi_4526	0.23	+0.2
5,411,032	-		Echvi_4526	0.23	+0.5
5,411,032	-		Echvi_4526	0.23	-0.1
5,411,033	+		Echvi_4526	0.23	-0.2
5,411,051	+		Echvi_4526	0.28	+1.4
5,411,057	+		Echvi_4526	0.30	+0.1
5,411,058	-		Echvi_4526	0.30	+1.5
5,411,074	+		Echvi_4526	0.34	+0.3
5,411,074	+		Echvi_4526	0.34	+1.1
5,411,074	+		Echvi_4526	0.34	+0.7
5,411,074	+		Echvi_4526	0.34	+0.1
5,411,074	+		Echvi_4526	0.34	+1.5
5,411,075	-		Echvi_4526	0.34	-0.2
5,411,075	-		Echvi_4526	0.34	+0.4
5,411,075	-		Echvi_4526	0.34	+0.5
5,411,093	-		Echvi_4526	0.39	-0.0
5,411,100	+		Echvi_4526	0.41	-3.0
5,411,110	+		Echvi_4526	0.44	+0.3
5,411,110	+		Echvi_4526	0.44	-1.2
5,411,183	-		Echvi_4526	0.63	-1.3
5,411,239	-		Echvi_4526	0.78	-2.0
5,411,239	-		Echvi_4526	0.78	-1.3
5,411,259	+		Echvi_4526	0.83	-0.3
5,411,263	+		Echvi_4526	0.85	+1.5
5,411,323	+				+2.8
5,411,323	+				-1.0
5,411,324	-				+0.2
5,411,324	-				-0.7
5,411,326	+				-0.1
5,411,326	+				+0.4
5,411,326	+				-0.7
5,411,327	-				-0.5
5,411,328	+				-0.8
5,411,329	-				-2.7
5,411,329	-				-0.2
5,411,329	-				+0.8
5,411,329	-				-2.4
5,411,329	-				-0.1
5,411,330	+				+0.5
5,411,330	+				+0.3
5,411,330	+				-0.9
5,411,330	+				-0.9
5,411,331	-				+1.5
5,411,331	-				+0.1
5,411,331	-				-0.4
5,411,331	-				-1.0
5,411,331	-				-0.7
5,411,331	-				-0.6
5,411,331	-				-1.5
5,411,331	-				-0.2
5,411,335	-				-1.0
5,411,369	-		Echvi_4527	0.29	-0.2
5,411,397	+		Echvi_4527	0.45	+2.3
5,411,413	+		Echvi_4527	0.54	-0.7
5,411,427	-		Echvi_4527	0.63	-2.3
5,411,473	-		Echvi_4527	0.89	-1.4
5,411,498	+				-1.3
5,411,499	-				-1.4
5,411,499	-				-1.2
5,411,499	-				-2.0
5,411,499	-				-2.2
5,411,502	+				-0.3
5,411,502	+				-1.1
5,411,502	+				+0.1
5,411,503	-				-0.2
5,411,503	-				-1.6
5,411,505	+				-1.1
5,411,505	+				+0.5
5,411,505	+				+1.2
5,411,505	+				-0.2
5,411,506	-				-0.2
5,411,506	-				+0.1
5,411,510	-				+1.2
5,411,510	-				-1.2
5,411,510	-				+0.3
5,411,513	+				+0.8
5,411,513	+				+0.2
5,411,514	-				-1.3
5,411,514	-				-0.2
5,411,514	-				-0.5
5,411,514	-				-0.9
5,411,514	-				-0.9
5,411,514	-				-0.2
5,411,515	+				+0.7
5,411,516	-				-0.9
5,411,516	-				+0.3
5,411,516	-				+0.3
5,411,516	-				+0.6
5,411,527	+				-1.7
5,411,528	-				-1.5
5,411,528	-				-1.6
5,411,528	-				+0.3
5,411,647	-				-0.6
5,411,647	-				-1.6
5,411,681	+				+0.0
5,411,747	+				-0.7
5,411,747	+				+0.0
5,411,748	-				+0.8
5,411,752	+				-0.7
5,411,752	+				+0.6
5,411,753	-				+2.1
5,411,758	-				+0.3
5,411,758	-				-0.6
5,411,771	+				-1.9
5,411,775	+				+0.3
5,411,775	+				+0.8
5,411,781	+				-0.0
5,411,838	+				+0.0
5,411,838	+				-1.5
5,411,839	-				+0.6
5,411,839	-				+1.3
5,411,866	+				-3.0
5,411,883	-				-1.1
5,411,930	+				-0.6
5,411,934	+				+0.3
5,411,934	+				+0.7
5,411,993	+				-0.6
5,412,022	+				-0.7
5,412,023	-				+0.6
5,412,054	+				+1.1
5,412,054	+				-0.0
5,412,054	+				+0.4
5,412,055	-				-0.2
5,412,055	-				-0.1
5,412,055	-				+0.0
5,412,118	+				+0.3
5,412,118	+				-0.1
5,412,121	-				-0.4
5,412,121	-				+0.8
5,412,121	-				+0.6
5,412,137	-				+0.3
5,412,170	+				+0.7
5,412,282	+		Echvi_4528	0.14	-1.0
5,412,282	+		Echvi_4528	0.14	-0.2
5,412,283	-		Echvi_4528	0.14	+0.4
5,412,311	+		Echvi_4528	0.17	+0.0
5,412,311	+		Echvi_4528	0.17	-0.2
5,412,328	+		Echvi_4528	0.19	-1.5
5,412,328	+		Echvi_4528	0.19	-2.2
5,412,369	-				+1.8
5,412,447	+		Echvi_4528	0.32	-0.8
5,412,447	+		Echvi_4528	0.32	+0.8
5,412,447	+		Echvi_4528	0.32	+0.2
5,412,461	-		Echvi_4528	0.34	+0.2
5,412,461	-		Echvi_4528	0.34	+1.4