Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4051

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
4,856,871	+				-0.5
4,856,964	-				-0.5
4,856,968	-				+0.7
4,856,982	-				-0.3
4,856,990	-				+1.9
4,857,010	-				-0.5
4,857,063	+				+0.5
4,857,063	+				-3.1
4,857,086	+				-0.1
4,857,168	+				-1.3
4,857,168	+				-2.8
4,857,189	+				-3.5
4,857,224	+				-2.1
4,857,471	-		Echvi_4051	0.13	-0.2
4,857,503	-		Echvi_4051	0.14	-0.9
4,858,962	-		Echvi_4051	0.59	-3.0
4,859,255	-		Echvi_4051	0.68	+0.9
4,860,071	+				-0.5
4,860,175	+				+0.3
4,860,352	+				+1.9
4,860,354	+				+1.5
4,860,355	-				-0.2
4,860,386	-				+0.4
4,860,387	+				+0.4
4,860,416	+				-0.2
4,860,444	+				+0.5
4,860,470	+				+0.0
4,860,471	-				+0.7
4,860,493	+				+0.3
4,860,493	+				-0.2
4,860,494	-				-0.1
4,860,494	-				+1.3
4,860,494	-				+0.4
4,860,494	-				-1.7
4,860,499	+				-0.7
4,860,546	+				+0.3
4,860,546	+				-1.0
4,860,547	-				-0.4
4,860,608	+				+0.3
4,860,608	+				-0.0
4,860,609	-				+1.1
4,860,609	-				-0.7
4,860,609	-				-1.1
4,860,612	-				-0.4
4,860,617	+				-1.0
4,860,617	+				+0.5
4,860,646	+				-0.5
4,860,647	-				-1.1
4,860,668	-				-1.8
4,860,749	-				-0.4
4,860,770	-				-0.3
4,860,786	-				-1.4
4,860,869	+		Echvi_4052	0.14	+0.6
4,860,870	-		Echvi_4052	0.14	+1.9
4,860,937	+		Echvi_4052	0.23	-1.2
4,860,978	+		Echvi_4052	0.28	+0.3
4,860,979	-		Echvi_4052	0.28	+0.5
4,860,979	-		Echvi_4052	0.28	-0.4
4,860,979	-		Echvi_4052	0.28	-0.1
4,860,983	-		Echvi_4052	0.29	+3.5
4,860,983	-		Echvi_4052	0.29	+0.8
4,860,999	-		Echvi_4052	0.31	-0.2
4,861,083	-		Echvi_4052	0.42	+1.0
4,861,219	-		Echvi_4052	0.60	-0.6
4,861,219	-		Echvi_4052	0.60	-0.6
4,861,231	-		Echvi_4052	0.61	-0.5
4,861,313	+		Echvi_4052	0.72	-1.2