Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4017

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
4,810,495	+		Echvi_4016	0.40	-0.6
4,810,547	+		Echvi_4016	0.44	+0.5
4,810,547	+		Echvi_4016	0.44	+1.3
4,810,632	+		Echvi_4016	0.50	+0.4
4,810,632	+		Echvi_4016	0.50	-0.1
4,810,633	-		Echvi_4016	0.50	-0.8
4,810,654	+		Echvi_4016	0.52	-1.0
4,810,666	-		Echvi_4016	0.53	+0.2
4,810,666	-		Echvi_4016	0.53	+1.3
4,810,666	-		Echvi_4016	0.53	-0.7
4,810,697	+		Echvi_4016	0.55	-0.1
4,810,698	-		Echvi_4016	0.55	-2.7
4,810,717	+		Echvi_4016	0.57	+1.2
4,810,717	+		Echvi_4016	0.57	-0.6
4,810,717	+		Echvi_4016	0.57	-0.2
4,810,718	-		Echvi_4016	0.57	-0.1
4,810,720	+		Echvi_4016	0.57	+0.5
4,810,721	-		Echvi_4016	0.57	-1.1
4,810,721	-		Echvi_4016	0.57	+0.5
4,810,780	-		Echvi_4016	0.61	-0.5
4,810,796	+		Echvi_4016	0.62	-1.2
4,810,796	+		Echvi_4016	0.62	-2.7
4,810,849	-		Echvi_4016	0.66	-1.6
4,811,028	+		Echvi_4016	0.79	+0.1
4,811,074	+		Echvi_4016	0.83	+0.7
4,811,074	+		Echvi_4016	0.83	-0.0
4,811,075	-		Echvi_4016	0.83	-0.0
4,811,075	-		Echvi_4016	0.83	-0.2
4,811,075	-		Echvi_4016	0.83	+0.1
4,811,090	+		Echvi_4016	0.84	-1.5
4,811,090	+		Echvi_4016	0.84	-1.0
4,811,095	-		Echvi_4016	0.84	+2.4
4,811,095	-		Echvi_4016	0.84	+1.3
4,811,095	-		Echvi_4016	0.84	+0.2
4,811,324	+				-0.3
4,811,325	-				+0.9
4,811,325	-				-0.5
4,811,327	+				-0.3
4,811,327	+				+0.6
4,811,328	-				+2.4
4,811,353	-				-1.0
4,811,367	+				-1.3
4,811,521	-				+0.5
4,811,527	+				-0.1
4,811,528	-				+2.0
4,811,611	-		Echvi_4017	0.14	-0.5
4,811,788	+		Echvi_4017	0.31	-1.0
4,811,880	+		Echvi_4017	0.40	-1.4
4,811,881	-		Echvi_4017	0.40	-0.3
4,812,026	+		Echvi_4017	0.54	+0.5
4,812,027	-		Echvi_4017	0.54	+1.3
4,812,203	+		Echvi_4017	0.71	-0.1
4,812,315	-		Echvi_4017	0.82	-0.4
4,812,323	+		Echvi_4017	0.82	-0.0
4,812,323	+		Echvi_4017	0.82	+0.2
4,812,323	+		Echvi_4017	0.82	-1.2
4,812,324	-		Echvi_4017	0.82	+0.6
4,812,368	-		Echvi_4017	0.87	+0.8
4,812,368	-		Echvi_4017	0.87	+0.6
4,812,386	-		Echvi_4017	0.88	+0.3
4,812,388	+		Echvi_4017	0.89	-0.9
4,812,388	+		Echvi_4017	0.89	-0.1
4,812,389	-		Echvi_4017	0.89	-1.2
4,812,422	-				+0.3
4,812,423	+				-3.5
4,812,423	+				+1.9
4,812,423	+				-1.0
4,812,423	+				+0.2
4,812,424	-				+1.5
4,812,424	-				-1.0
4,812,424	-				+0.0
4,812,424	-				-0.4
4,812,424	-				+0.0
4,812,427	+				-1.6
4,812,428	-				-1.1
4,812,433	-				+2.2
4,812,553	+				-1.5
4,812,554	-				-2.2
4,812,622	-				-0.2
4,812,640	+				-0.5
4,812,640	+				-0.9
4,812,641	-				+0.6
4,812,656	-				-0.7
4,812,806	+		Echvi_4018	0.53	-0.3
4,812,807	-		Echvi_4018	0.53	+0.2
4,812,818	+		Echvi_4018	0.57	-0.1
4,812,818	+		Echvi_4018	0.57	-1.1
4,812,818	+		Echvi_4018	0.57	-0.1
4,812,818	+		Echvi_4018	0.57	-0.2
4,812,819	-		Echvi_4018	0.57	-1.0
4,812,819	-		Echvi_4018	0.57	+0.5
4,812,857	+		Echvi_4018	0.71	-2.3
4,812,868	+		Echvi_4018	0.74	-0.5
4,812,868	+		Echvi_4018	0.74	+0.6
4,812,895	+		Echvi_4018	0.84	-0.5
4,812,896	-		Echvi_4018	0.84	-0.9
4,812,896	-		Echvi_4018	0.84	+0.8
4,812,896	-		Echvi_4018	0.84	-0.9
4,812,900	+		Echvi_4018	0.86	-1.1
4,812,900	+		Echvi_4018	0.86	+0.4
4,812,900	+		Echvi_4018	0.86	+0.3
4,812,901	-		Echvi_4018	0.86	+0.3
4,812,901	-		Echvi_4018	0.86	-0.0
4,812,947	+				-0.7
4,812,969	-				-0.2
4,812,976	+				-0.1
4,812,976	+				+0.3
4,812,976	+				+0.6
4,812,977	-				-0.7
4,812,983	-				-1.3
4,812,983	-				-1.5
4,812,983	-				-0.7
4,812,986	+				-0.1
4,812,986	+				+1.6
4,812,987	-				+1.1
4,812,987	-				-0.2
4,812,987	-				+0.9
4,812,987	-				+0.1
4,813,031	-				+0.2
4,813,064	+				-1.3
4,813,065	-				+0.9
4,813,065	-				+0.2
4,813,092	-				-0.4
4,813,097	+				-0.1
4,813,097	+				-0.5
4,813,098	-				+0.0
4,813,098	-				-0.7
4,813,120	-				-0.9
4,813,139	+				+0.9
4,813,140	-				+0.5
4,813,151	+				+0.9
4,813,155	+				-0.0
4,813,155	+				+0.2
4,813,220	+				-1.2
4,813,299	-				-0.5
4,813,299	-				-1.6
4,813,299	-				+0.8
4,813,311	+				-0.7
4,813,319	+				+1.1
4,813,320	-				-1.0
4,813,321	+				-0.8
4,813,322	-				+0.2
4,813,322	-				-2.0
4,813,322	-				+1.6
4,813,322	-				-0.1
4,813,425	+		Echvi_4019	0.12	-0.6
4,813,425	+		Echvi_4019	0.12	-0.3
4,813,426	-		Echvi_4019	0.12	+0.5
4,813,433	+		Echvi_4019	0.12	-0.2
4,813,434	-		Echvi_4019	0.12	+0.4
4,813,434	-		Echvi_4019	0.12	+0.9
4,813,435	+		Echvi_4019	0.12	+0.0
4,813,469	+		Echvi_4019	0.15	+0.0
4,813,487	+		Echvi_4019	0.16	+0.2
4,813,487	+		Echvi_4019	0.16	-0.9
4,813,487	+		Echvi_4019	0.16	-0.7
4,813,487	+		Echvi_4019	0.16	+0.0
4,813,488	-		Echvi_4019	0.16	-1.8