Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3951

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
4,734,680	+		Echvi_3950	0.33	+0.4
4,734,699	-		Echvi_3950	0.34	+0.0
4,734,700	+		Echvi_3950	0.34	-0.9
4,734,825	+		Echvi_3950	0.44	-0.5
4,734,826	-		Echvi_3950	0.44	-1.1
4,734,866	+		Echvi_3950	0.48	+0.6
4,734,866	+		Echvi_3950	0.48	-0.1
4,734,867	-		Echvi_3950	0.48	-1.9
4,734,867	-		Echvi_3950	0.48	-0.3
4,734,867	-		Echvi_3950	0.48	-0.8
4,734,957	+		Echvi_3950	0.55	-0.1
4,734,999	-		Echvi_3950	0.58	+0.8
4,735,004	+		Echvi_3950	0.59	-0.4
4,735,123	-		Echvi_3950	0.68	-2.1
4,735,166	-		Echvi_3950	0.72	+0.1
4,735,181	-		Echvi_3950	0.73	+0.1
4,735,181	-		Echvi_3950	0.73	-1.5
4,735,188	-		Echvi_3950	0.73	-0.3
4,735,202	-		Echvi_3950	0.75	+1.4
4,735,293	-		Echvi_3950	0.82	-0.9
4,735,294	+		Echvi_3950	0.82	-0.2
4,735,367	+		Echvi_3950	0.88	-0.3
4,735,367	+		Echvi_3950	0.88	-0.2
4,735,368	-		Echvi_3950	0.88	-0.8
4,735,468	+				+1.6
4,735,486	-				-0.2
4,735,486	-				-0.1
4,735,520	+				+0.4
4,735,520	+				-1.1
4,735,521	-				-2.1
4,735,521	-				+1.0
4,735,628	+				-0.2
4,735,632	+				-0.0
4,735,690	+				+0.8
4,735,691	-				-0.3
4,735,691	-				-0.3
4,735,718	+				-1.5
4,735,723	+				-1.9
4,735,723	+				+1.5
4,735,724	-				+0.1
4,735,771	+		Echvi_3951	0.11	-1.9
4,735,771	+		Echvi_3951	0.11	-0.7
4,735,826	-		Echvi_3951	0.16	-0.1
4,735,826	-		Echvi_3951	0.16	+0.4
4,735,860	+		Echvi_3951	0.20	-0.4
4,736,043	-		Echvi_3951	0.38	-1.5
4,736,043	-		Echvi_3951	0.38	-1.6
4,736,044	+		Echvi_3951	0.38	-2.4
4,736,085	-		Echvi_3951	0.42	+1.2
4,736,261	+		Echvi_3951	0.60	-1.1
4,736,262	-		Echvi_3951	0.60	-0.9
4,736,282	+		Echvi_3951	0.62	-0.5
4,736,282	+		Echvi_3951	0.62	-0.1
4,736,282	+		Echvi_3951	0.62	+0.6
4,736,283	-		Echvi_3951	0.62	+1.4
4,736,283	-		Echvi_3951	0.62	-0.4
4,736,334	+		Echvi_3951	0.67	+0.5
4,736,387	+		Echvi_3951	0.72	-1.4
4,736,428	+		Echvi_3951	0.76	-0.5
4,736,429	-		Echvi_3951	0.76	-0.1
4,736,489	+		Echvi_3951	0.82	-0.4
4,736,489	+		Echvi_3951	0.82	-1.9
4,736,489	+		Echvi_3951	0.82	-0.7
4,736,489	+		Echvi_3951	0.82	-0.5
4,736,489	+		Echvi_3951	0.82	-0.6
4,736,489	+		Echvi_3951	0.82	-0.7
4,736,490	-		Echvi_3951	0.83	-1.2
4,736,490	-		Echvi_3951	0.83	-1.1
4,736,490	-		Echvi_3951	0.83	-1.7
4,736,490	-		Echvi_3951	0.83	-1.9
4,736,490	-		Echvi_3951	0.83	+0.1
4,736,536	+		Echvi_3951	0.87	-0.7
4,736,642	+				-1.2
4,736,642	+				+0.1
4,736,643	-				+1.1
4,736,666	-				+0.9
4,736,666	-				+0.8
4,736,679	+				-1.2
4,736,679	+				-1.4
4,736,679	+				-0.0
4,736,679	+				+0.2
4,736,679	+				-1.9
4,736,679	+				-0.5
4,736,680	-				-0.3
4,736,680	-				+0.4
4,736,680	-				-0.2
4,736,680	-				-0.9
4,736,685	+				-0.5
4,736,685	+				-1.5
4,736,685	+				-0.2
4,736,686	-				+0.4
4,736,714	-				-0.0
4,736,717	-				+0.7
4,736,735	+				-0.0
4,736,743	+				+1.0
4,736,877	+				+2.2
4,736,877	+				+1.1
4,736,877	+				+0.4
4,736,979	+		Echvi_3952	0.17	+2.3
4,737,079	+		Echvi_3952	0.24	+0.8
4,737,272	+		Echvi_3952	0.37	-0.1
4,737,295	+		Echvi_3952	0.39	+1.4
4,737,431	+		Echvi_3952	0.49	+0.6
4,737,567	+		Echvi_3952	0.58	+0.8