Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3870

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
4,626,826	+				+2.5
4,626,826	+				+1.7
4,626,899	+				+2.2
4,626,900	-				-0.4
4,626,900	-				+0.2
4,626,904	+				-1.6
4,626,905	-				-0.9
4,626,907	+				+0.3
4,626,907	+				+0.4
4,626,907	+				-0.3
4,627,086	+				-2.0
4,627,086	+				-0.5
4,627,086	+				+0.9
4,627,087	-				+0.6
4,627,087	-				-1.1
4,627,215	+		Echvi_3869	0.24	+0.9
4,627,216	-		Echvi_3869	0.24	+0.1
4,627,223	+		Echvi_3869	0.25	+0.6
4,627,249	+		Echvi_3869	0.28	-1.5
4,627,250	-		Echvi_3869	0.28	-0.7
4,627,323	-		Echvi_3869	0.38	-0.4
4,627,359	+		Echvi_3869	0.43	-1.3
4,627,405	-		Echvi_3869	0.49	+0.9
4,627,431	+		Echvi_3869	0.52	-2.2
4,627,431	+		Echvi_3869	0.52	+1.5
4,627,432	-		Echvi_3869	0.52	+1.1
4,627,433	+		Echvi_3869	0.52	-0.4
4,627,434	-		Echvi_3869	0.52	+1.4
4,627,434	-		Echvi_3869	0.52	-0.3
4,627,435	-		Echvi_3869	0.53	+0.0
4,627,438	+		Echvi_3869	0.53	-2.2
4,627,439	-		Echvi_3869	0.53	+1.1
4,627,439	-		Echvi_3869	0.53	+0.3
4,627,487	-		Echvi_3869	0.59	+1.2
4,627,541	+		Echvi_3869	0.67	-0.8
4,627,585	-		Echvi_3869	0.72	+0.5
4,627,619	+		Echvi_3869	0.77	+1.9
4,627,619	+		Echvi_3869	0.77	-3.0
4,627,620	-		Echvi_3869	0.77	+0.3
4,627,621	+		Echvi_3869	0.77	-0.2
4,627,621	+		Echvi_3869	0.77	-0.3
4,627,622	-		Echvi_3869	0.77	-3.1
4,627,622	-		Echvi_3869	0.77	+0.3
4,627,623	+		Echvi_3869	0.77	-1.8
4,627,623	+		Echvi_3869	0.77	+0.1
4,627,623	+		Echvi_3869	0.77	+0.9
4,627,624	-		Echvi_3869	0.77	-0.4
4,627,624	-		Echvi_3869	0.77	-1.9
4,627,898	-		Echvi_3870	0.87	-1.6
4,627,914	+				+0.9
4,627,915	-				-0.2
4,627,915	-				+1.5
4,627,915	-				-1.2
4,627,917	+				-0.2
4,627,926	+				+1.4
4,627,927	-				-1.7
4,627,930	+				-1.4
4,627,931	-				+0.6
4,627,934	+				+0.3
4,627,934	+				+0.0
4,627,934	+				-0.9
4,627,934	+				-2.4
4,627,934	+				+1.9
4,627,983	+				-1.7
4,627,984	-				-2.6
4,627,984	-				+0.3
4,627,984	-				-0.6
4,628,001	-				-1.7
4,628,031	+				-0.8
4,628,069	+		Echvi_3871	0.16	-0.2
4,628,123	+		Echvi_3871	0.29	-0.9
4,628,123	+		Echvi_3871	0.29	-0.6
4,628,177	+		Echvi_3871	0.41	-0.2
4,628,178	-		Echvi_3871	0.42	+2.1
4,628,202	+		Echvi_3871	0.47	+0.5
4,628,262	+		Echvi_3871	0.62	-1.5
4,628,352	+		Echvi_3871	0.83	+0.9
4,628,401	-				+0.1
4,628,403	+				-0.1
4,628,404	-				+0.0
4,628,421	-				+0.1
4,628,421	-				+0.1
4,628,421	-				-0.1
4,628,421	-				+0.1
4,628,425	+				+0.6
4,628,426	-				+0.3
4,628,426	-				-0.4
4,628,444	+				-0.6
4,628,450	+				+0.3
4,628,507	+				-1.1
4,628,739	+		Echvi_3872	0.65	-0.7
4,628,747	-		Echvi_3872	0.67	-0.0
4,628,824	-		Echvi_3872	0.88	-1.5
4,628,834	-				-2.4
4,628,881	-				-2.8
4,628,881	-				-0.4
4,628,888	+				-0.0
4,628,889	-				-0.5
4,628,893	+				+0.4