Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3805

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
4,540,627	+		Echvi_3804	0.33	+0.8
4,540,643	+		Echvi_3804	0.34	+1.9
4,540,643	+		Echvi_3804	0.34	-1.3
4,540,643	+		Echvi_3804	0.34	+0.1
4,540,647	+		Echvi_3804	0.35	-0.7
4,540,647	+		Echvi_3804	0.35	-0.8
4,540,647	+		Echvi_3804	0.35	+0.2
4,540,647	+		Echvi_3804	0.35	-0.1
4,540,670	+		Echvi_3804	0.37	-0.3
4,540,674	+		Echvi_3804	0.37	+1.9
4,540,762	-		Echvi_3804	0.46	-0.5
4,540,805	+		Echvi_3804	0.50	-0.5
4,540,805	+		Echvi_3804	0.50	+1.4
4,540,805	+		Echvi_3804	0.50	+0.1
4,540,805	+		Echvi_3804	0.50	+0.3
4,540,805	+		Echvi_3804	0.50	-2.8
4,540,806	-		Echvi_3804	0.50	+1.4
4,540,847	+		Echvi_3804	0.53	-0.1
4,540,847	+		Echvi_3804	0.53	-0.2
4,540,855	+		Echvi_3804	0.54	-0.3
4,540,856	-		Echvi_3804	0.54	+0.1
4,540,856	-		Echvi_3804	0.54	-0.2
4,540,899	+		Echvi_3804	0.58	-0.5
4,540,911	-		Echvi_3804	0.59	+1.7
4,540,912	+		Echvi_3804	0.59	+0.5
4,540,931	+		Echvi_3804	0.61	-0.2
4,540,978	+		Echvi_3804	0.66	-0.3
4,541,006	+		Echvi_3804	0.68	+1.1
4,541,007	-		Echvi_3804	0.68	+0.1
4,541,089	+		Echvi_3804	0.76	+0.6
4,541,089	+		Echvi_3804	0.76	+0.2
4,541,165	+		Echvi_3804	0.83	+0.3
4,541,166	-		Echvi_3804	0.83	+0.2
4,541,179	+		Echvi_3804	0.84	+0.9
4,541,179	+		Echvi_3804	0.84	-0.3
4,541,180	-		Echvi_3804	0.84	+0.1
4,541,191	-		Echvi_3804	0.85	-0.5
4,541,191	-		Echvi_3804	0.85	-1.1
4,541,191	-		Echvi_3804	0.85	-0.1
4,541,194	+		Echvi_3804	0.86	-0.3
4,541,220	-		Echvi_3804	0.88	-0.1
4,541,237	+		Echvi_3804	0.90	-0.5
4,541,238	-		Echvi_3804	0.90	-1.3
4,541,238	-		Echvi_3804	0.90	-0.6
4,541,238	-		Echvi_3804	0.90	+0.9
4,541,241	-				+0.4
4,541,299	+				+0.2
4,541,326	-				-0.1
4,541,366	-				-0.1
4,541,459	+				+1.0
4,541,460	-				-0.7
4,541,460	-				-0.9
4,541,516	+				+1.6
4,541,516	+				-0.3
4,541,516	+				+2.6
4,541,520	+				-0.1
4,541,520	+				+1.0
4,541,560	+				+0.9
4,541,566	+				-0.9
4,541,589	+				-0.4
4,541,618	+				+0.2
4,541,621	-				+0.1
4,541,678	-		Echvi_3805	0.16	+0.2
4,541,678	-		Echvi_3805	0.16	+1.4
4,541,838	-		Echvi_3805	0.38	+1.0
4,541,838	-		Echvi_3805	0.38	+0.9
4,541,838	-		Echvi_3805	0.38	-0.9
4,542,094	-		Echvi_3805	0.74	+1.1
4,542,094	-		Echvi_3805	0.74	+0.6
4,542,117	+		Echvi_3805	0.77	+0.1
4,542,199	-		Echvi_3805	0.89	-0.7
4,542,261	+				-0.3
4,542,261	+				-0.6
4,542,303	+				+0.3
4,542,303	+				+0.4
4,542,303	+				+0.7
4,542,345	+				+0.0
4,542,345	+				+1.9
4,542,579	+				+0.3
4,542,580	-				-0.1
4,542,638	+				-0.9
4,542,640	+				+0.7
4,542,668	+				-0.6
4,542,696	+				-1.1
4,542,696	+				-0.9
4,542,696	+				+0.6
4,542,696	+				-0.6
4,542,696	+				-0.5
4,542,703	-				-0.3
4,542,703	-				-2.5
4,542,703	-				-0.2
4,542,727	+				+0.6
4,542,780	-		Echvi_3806	0.13	+0.4
4,542,788	-		Echvi_3806	0.13	+1.0
4,542,946	+		Echvi_3806	0.22	-0.9
4,542,947	-		Echvi_3806	0.22	+0.4
4,542,947	-		Echvi_3806	0.22	-0.6
4,542,951	-		Echvi_3806	0.23	+0.6
4,543,002	-		Echvi_3806	0.26	+0.3
4,543,002	-		Echvi_3806	0.26	+1.1
4,543,002	-		Echvi_3806	0.26	-0.5
4,543,002	-		Echvi_3806	0.26	+0.6
4,543,005	+		Echvi_3806	0.26	-0.3
4,543,070	+		Echvi_3806	0.29	-0.6
4,543,072	+		Echvi_3806	0.30	-1.5
4,543,072	+		Echvi_3806	0.30	-0.3
4,543,073	-		Echvi_3806	0.30	-0.9
4,543,073	-		Echvi_3806	0.30	-0.4
4,543,073	-		Echvi_3806	0.30	-0.5
4,543,077	-		Echvi_3806	0.30	+0.2
4,543,138	+		Echvi_3806	0.33	+0.1
4,543,139	-		Echvi_3806	0.33	+1.1
4,543,169	-		Echvi_3806	0.35	-0.5
4,543,169	-		Echvi_3806	0.35	+0.7
4,543,171	-		Echvi_3806	0.35	+0.6
4,543,251	+		Echvi_3806	0.40	+1.0
4,543,251	+		Echvi_3806	0.40	-0.3
4,543,252	-		Echvi_3806	0.40	-0.2