Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3788

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
4,519,469	-		Echvi_3787	0.57	+1.6
4,519,520	+		Echvi_3787	0.60	-3.0
4,519,520	+		Echvi_3787	0.60	+1.1
4,519,521	-		Echvi_3787	0.60	+2.1
4,519,546	+		Echvi_3787	0.61	-0.4
4,519,546	+		Echvi_3787	0.61	+0.7
4,519,583	-		Echvi_3787	0.63	+1.8
4,519,623	+		Echvi_3787	0.65	+0.6
4,519,623	+		Echvi_3787	0.65	+1.9
4,519,624	-		Echvi_3787	0.65	+2.4
4,519,624	-		Echvi_3787	0.65	+1.2
4,519,625	+		Echvi_3787	0.66	-3.1
4,519,626	-		Echvi_3787	0.66	+2.0
4,519,658	-		Echvi_3787	0.67	+1.4
4,519,658	-		Echvi_3787	0.67	+2.0
4,519,658	-		Echvi_3787	0.67	+1.6
4,519,692	-		Echvi_3787	0.69	+2.2
4,519,695	+		Echvi_3787	0.69	-1.9
4,519,695	+		Echvi_3787	0.69	-1.0
4,519,696	-		Echvi_3787	0.69	+1.0
4,519,696	-		Echvi_3787	0.69	+2.5
4,519,710	-		Echvi_3787	0.70	+1.8
4,519,747	+		Echvi_3787	0.72	-1.9
4,519,747	+		Echvi_3787	0.72	-0.7
4,519,747	+		Echvi_3787	0.72	-0.5
4,519,747	+		Echvi_3787	0.72	+1.1
4,519,747	+		Echvi_3787	0.72	-0.0
4,519,748	-		Echvi_3787	0.72	+0.9
4,519,758	+		Echvi_3787	0.73	+0.5
4,519,759	-		Echvi_3787	0.73	+1.7
4,519,759	-		Echvi_3787	0.73	+1.4
4,519,832	-		Echvi_3787	0.77	+1.3
4,519,911	+		Echvi_3787	0.81	+0.1
4,519,912	-		Echvi_3787	0.81	+1.5
4,519,912	-		Echvi_3787	0.81	+0.9
4,519,914	+		Echvi_3787	0.81	+0.5
4,519,964	-		Echvi_3787	0.84	+0.9
4,519,969	+		Echvi_3787	0.84	-0.3
4,519,969	+		Echvi_3787	0.84	-1.0
4,519,969	+		Echvi_3787	0.84	+0.2
4,519,969	+		Echvi_3787	0.84	+0.7
4,519,969	+		Echvi_3787	0.84	+0.7
4,519,969	+		Echvi_3787	0.84	-0.3
4,519,969	+		Echvi_3787	0.84	-0.8
4,519,970	-		Echvi_3787	0.84	+2.5
4,519,970	-		Echvi_3787	0.84	+0.7
4,519,973	+		Echvi_3787	0.84	-1.3
4,519,973	+		Echvi_3787	0.84	+0.2
4,519,973	+		Echvi_3787	0.84	-1.1
4,519,974	-		Echvi_3787	0.84	+1.0
4,520,218	+				+1.4
4,520,218	+				-2.9
4,520,219	-				+1.2
4,520,219	-				-0.7
4,520,219	-				+2.3
4,520,220	+				-0.2
4,520,220	+				+0.3
4,520,221	-				+0.9
4,520,221	-				+0.3
4,520,278	-				+1.1
4,520,352	+				-2.1
4,520,364	+				+0.3
4,520,364	+				+0.3
4,520,364	+				-0.2
4,520,560	+		Echvi_3788	0.27	-0.7
4,520,560	+		Echvi_3788	0.27	+0.4
4,520,561	-		Echvi_3788	0.27	-0.1
4,520,597	-		Echvi_3788	0.31	+1.5
4,520,674	-		Echvi_3788	0.40	-0.5
4,520,674	-		Echvi_3788	0.40	-0.6
4,520,764	+		Echvi_3788	0.50	-0.3
4,520,764	+		Echvi_3788	0.50	-2.0
4,520,765	-		Echvi_3788	0.50	-0.5
4,520,786	-		Echvi_3788	0.52	-0.2
4,520,786	-		Echvi_3788	0.52	-0.9
4,520,786	-		Echvi_3788	0.52	-0.0
4,520,804	+		Echvi_3788	0.55	-1.7
4,520,833	-		Echvi_3788	0.58	-0.5
4,520,883	-		Echvi_3788	0.63	-0.6
4,520,921	+		Echvi_3788	0.68	+0.0
4,520,921	+		Echvi_3788	0.68	-0.6
4,520,958	+		Echvi_3788	0.72	-1.8
4,520,959	-		Echvi_3788	0.72	+0.6
4,520,976	-		Echvi_3788	0.74	-0.0
4,520,998	-		Echvi_3788	0.76	-0.3
4,521,117	-		Echvi_3788	0.90	-0.1
4,521,117	-		Echvi_3788	0.90	-0.4
4,521,117	-		Echvi_3788	0.90	-2.3
4,521,119	+				+1.0
4,521,119	+				-1.1
4,521,119	+				+0.3
4,521,119	+				-0.3
4,521,119	+				-0.8
4,521,120	-				-0.1
4,521,120	-				+0.7
4,521,120	-				-0.3
4,521,120	-				-0.1
4,521,120	-				+1.9
4,521,120	-				+0.5
4,521,120	-				-0.5
4,521,120	-				+0.3
4,521,120	-				+1.9
4,521,173	-				+0.9
4,521,215	+				-1.1
4,521,276	+				+0.9
4,521,276	+				+0.4
4,521,277	-				+1.1
4,521,277	-				+1.4
4,521,280	+				+0.2
4,521,280	+				+0.6
4,521,287	+				+0.2
4,521,291	-				+2.4
4,521,458	-		Echvi_3789	0.17	+0.3
4,521,458	-		Echvi_3789	0.17	+1.8
4,521,459	+		Echvi_3789	0.17	-0.2
4,521,460	-		Echvi_3789	0.17	+1.1
4,521,460	-		Echvi_3789	0.17	+1.9
4,521,461	+		Echvi_3789	0.17	+0.7
4,521,461	+		Echvi_3789	0.17	-0.8
4,521,462	-		Echvi_3789	0.17	+1.5
4,521,620	-		Echvi_3789	0.28	-0.1
4,521,708	+		Echvi_3789	0.34	-0.4
4,521,715	-		Echvi_3789	0.35	+0.8
4,521,764	+		Echvi_3789	0.38	+1.5
4,521,764	+		Echvi_3789	0.38	+0.7
4,521,764	+		Echvi_3789	0.38	-0.3
4,521,764	+		Echvi_3789	0.38	-0.9
4,521,764	+		Echvi_3789	0.38	-0.5
4,521,765	-		Echvi_3789	0.38	+1.1
4,521,765	-		Echvi_3789	0.38	-0.7
4,521,765	-		Echvi_3789	0.38	+0.4
4,521,765	-		Echvi_3789	0.38	+1.3
4,521,771	-		Echvi_3789	0.39	+1.1
4,521,799	-		Echvi_3789	0.41	+0.3
4,521,926	+		Echvi_3789	0.49	-0.0
4,521,977	+		Echvi_3789	0.53	-0.9
4,521,977	+		Echvi_3789	0.53	-0.4
4,521,987	-		Echvi_3789	0.54	-0.0
4,522,000	-		Echvi_3789	0.54	+1.9
4,522,000	-		Echvi_3789	0.54	-1.1
4,522,024	-		Echvi_3789	0.56	-0.1
4,522,090	-		Echvi_3789	0.61	+0.9
4,522,090	-		Echvi_3789	0.61	+0.6
4,522,090	-		Echvi_3789	0.61	+0.7
4,522,092	-		Echvi_3789	0.61	+0.9
4,522,092	-		Echvi_3789	0.61	+0.1
4,522,092	-		Echvi_3789	0.61	-0.1
4,522,092	-		Echvi_3789	0.61	-1.8
4,522,092	-		Echvi_3789	0.61	-0.5
4,522,185	+		Echvi_3789	0.67	-0.3
4,522,186	-		Echvi_3789	0.67	+0.6
4,522,195	+		Echvi_3789	0.68	-0.5