Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3780

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
4,506,210	+		Echvi_3779	0.37	-0.1
4,506,210	+		Echvi_3779	0.37	-0.9
4,506,211	-		Echvi_3779	0.37	+2.3
4,506,211	-		Echvi_3779	0.37	+1.0
4,506,300	+		Echvi_3779	0.43	-0.2
4,506,300	+		Echvi_3779	0.43	-0.1
4,506,301	-		Echvi_3779	0.43	-0.8
4,506,301	-		Echvi_3779	0.43	+0.1
4,506,301	-		Echvi_3779	0.43	-2.6
4,506,304	+		Echvi_3779	0.43	-0.1
4,506,305	-		Echvi_3779	0.43	+0.3
4,506,333	+		Echvi_3779	0.45	-0.2
4,506,333	+		Echvi_3779	0.45	-2.2
4,506,338	-		Echvi_3779	0.46	+1.4
4,506,387	+		Echvi_3779	0.49	-0.8
4,506,388	-		Echvi_3779	0.49	-0.8
4,506,403	+		Echvi_3779	0.50	+2.1
4,506,403	+		Echvi_3779	0.50	-0.0
4,506,403	+		Echvi_3779	0.50	-1.0
4,506,404	-		Echvi_3779	0.50	-0.7
4,506,405	+		Echvi_3779	0.50	+0.2
4,506,406	-		Echvi_3779	0.50	-1.1
4,506,406	-		Echvi_3779	0.50	-0.4
4,506,471	+		Echvi_3779	0.55	-2.4
4,506,472	-		Echvi_3779	0.55	-0.9
4,506,508	+		Echvi_3779	0.57	+0.4
4,506,519	+		Echvi_3779	0.58	+0.7
4,506,622	+		Echvi_3779	0.65	-0.3
4,506,622	+		Echvi_3779	0.65	-0.1
4,506,622	+		Echvi_3779	0.65	+0.1
4,506,623	-		Echvi_3779	0.65	+1.9
4,506,623	-		Echvi_3779	0.65	+2.1
4,506,675	+		Echvi_3779	0.69	-0.0
4,506,678	+		Echvi_3779	0.69	-0.9
4,506,678	+		Echvi_3779	0.69	-0.5
4,506,679	-		Echvi_3779	0.69	+0.8
4,506,679	-		Echvi_3779	0.69	-0.5
4,506,679	-		Echvi_3779	0.69	+0.6
4,506,682	-		Echvi_3779	0.69	+0.1
4,506,697	+		Echvi_3779	0.70	-0.5
4,506,775	+		Echvi_3779	0.76	+0.2
4,506,795	+		Echvi_3779	0.77	+0.6
4,506,796	-		Echvi_3779	0.77	+0.7
4,506,820	-		Echvi_3779	0.79	+2.5
4,506,820	-		Echvi_3779	0.79	-0.8
4,506,831	-		Echvi_3779	0.79	+0.9
4,506,956	+		Echvi_3779	0.88	+0.5
4,506,956	+		Echvi_3779	0.88	+1.1
4,506,961	-		Echvi_3779	0.88	-0.4
4,506,972	+		Echvi_3779	0.89	-0.0
4,506,973	-		Echvi_3779	0.89	-0.3
4,507,058	+				-0.7
4,507,058	+				-0.2
4,507,059	-				-0.7
4,507,059	-				+0.1
4,507,059	-				-0.5
4,507,098	-				-0.5
4,507,106	-				-0.7
4,507,108	-				+0.6
4,507,108	-				-0.3
4,507,108	-				+1.0
4,507,108	-				+0.7
4,507,133	-				+1.1
4,507,165	+				+0.7
4,507,165	+				+0.3
4,507,191	-				+2.6
4,507,292	+				+0.4
4,507,292	+				-0.3
4,507,292	+				-0.6
4,507,293	-				+1.9
4,507,294	+				-1.3
4,507,295	-				-0.2
4,507,295	-				-2.5
4,507,295	-				+1.1
4,507,306	-				+0.9
4,507,314	+				-0.1
4,507,315	-				+0.9
4,507,338	-				+0.3
4,507,368	-				+1.5
4,507,381	+				+0.8
4,507,389	-				-0.1
4,507,440	-				+1.4
4,507,478	+				-0.5
4,507,479	-				-0.7
4,507,479	-				-0.9
4,507,524	+		Echvi_3780	0.11	-1.8
4,507,525	-		Echvi_3780	0.11	-0.1
4,507,532	-		Echvi_3780	0.11	-0.3
4,507,570	+		Echvi_3780	0.13	-1.4
4,507,570	+		Echvi_3780	0.13	-2.7
4,507,580	+		Echvi_3780	0.13	+0.9
4,507,608	+		Echvi_3780	0.14	-1.1
4,507,608	+		Echvi_3780	0.14	-1.9
4,507,622	+		Echvi_3780	0.14	-1.4
4,507,623	-		Echvi_3780	0.14	-0.6
4,507,623	-		Echvi_3780	0.14	+1.0
4,507,651	+		Echvi_3780	0.15	-0.3
4,507,726	-		Echvi_3780	0.17	-0.3
4,507,784	+		Echvi_3780	0.19	-0.2
4,507,784	+		Echvi_3780	0.19	-1.9
4,507,785	-		Echvi_3780	0.19	-0.6
4,507,785	-		Echvi_3780	0.19	-0.4
4,507,815	+		Echvi_3780	0.20	-0.8
4,507,926	+		Echvi_3780	0.23	+0.7
4,507,953	+		Echvi_3780	0.24	-1.7
4,508,010	+		Echvi_3780	0.26	-0.1
4,508,010	+		Echvi_3780	0.26	+2.9
4,508,236	-		Echvi_3780	0.32	+0.1
4,508,249	+		Echvi_3780	0.33	-1.0
4,508,381	+		Echvi_3780	0.37	+0.9
4,508,385	+		Echvi_3780	0.37	+0.6
4,508,385	+		Echvi_3780	0.37	-0.4
4,508,385	+		Echvi_3780	0.37	+1.5
4,508,441	+		Echvi_3780	0.38	+0.3
4,508,442	-		Echvi_3780	0.38	-0.3
4,508,445	+		Echvi_3780	0.38	+0.1
4,508,459	+		Echvi_3780	0.39	-0.8
4,508,460	-		Echvi_3780	0.39	-0.1
4,508,464	+		Echvi_3780	0.39	+0.7
4,508,464	+		Echvi_3780	0.39	-0.0
4,508,518	-		Echvi_3780	0.41	-0.1
4,508,526	+		Echvi_3780	0.41	-1.7
4,508,560	-		Echvi_3780	0.42	-1.4
4,508,670	-		Echvi_3780	0.45	+0.8
4,508,693	+		Echvi_3780	0.46	-0.3
4,508,714	-		Echvi_3780	0.46	-0.0
4,508,714	-		Echvi_3780	0.46	-1.1
4,508,768	+		Echvi_3780	0.48	-1.4
4,508,768	+		Echvi_3780	0.48	-0.4
4,508,768	+		Echvi_3780	0.48	+2.3
4,508,769	-		Echvi_3780	0.48	+1.0
4,508,769	-		Echvi_3780	0.48	-0.4
4,508,769	-		Echvi_3780	0.48	+0.9
4,508,769	-		Echvi_3780	0.48	-0.1
4,508,770	+		Echvi_3780	0.48	+0.1
4,508,771	-		Echvi_3780	0.48	-1.1
4,508,771	-		Echvi_3780	0.48	+0.8
4,508,771	-		Echvi_3780	0.48	-1.1
4,508,816	-		Echvi_3780	0.49	-1.1
4,508,849	+		Echvi_3780	0.50	-0.1
4,508,854	-		Echvi_3780	0.51	+2.8
4,508,930	+		Echvi_3780	0.53	-0.4
4,508,930	+		Echvi_3780	0.53	+0.5
4,508,931	-		Echvi_3780	0.53	+1.3
4,508,963	+		Echvi_3780	0.54	-1.2
4,508,965	+		Echvi_3780	0.54	+1.6
4,508,966	-		Echvi_3780	0.54	-0.1
4,508,966	-		Echvi_3780	0.54	-1.6
4,508,967	+		Echvi_3780	0.54	+0.2
4,508,967	+		Echvi_3780	0.54	-1.2
4,508,968	-		Echvi_3780	0.54	+0.5
4,508,999	+		Echvi_3780	0.55	-1.3
4,509,000	-		Echvi_3780	0.55	+0.7
4,509,001	+		Echvi_3780	0.55	+1.8
4,509,002	-		Echvi_3780	0.55	-1.4
4,509,069	+		Echvi_3780	0.57	-0.7
4,509,069	+		Echvi_3780	0.57	-0.9
4,509,070	-		Echvi_3780	0.57	-1.6
4,509,070	-		Echvi_3780	0.57	-0.3
4,509,070	-		Echvi_3780	0.57	+0.4
4,509,134	+		Echvi_3780	0.59	-0.6
4,509,135	-		Echvi_3780	0.59	-3.5
4,509,179	+		Echvi_3780	0.60	-0.2
4,509,180	-		Echvi_3780	0.60	+0.4
4,509,415	+		Echvi_3780	0.67	-1.1
4,509,415	+		Echvi_3780	0.67	-1.7
4,509,415	+		Echvi_3780	0.67	-0.4
4,509,415	+		Echvi_3780	0.67	+1.1
4,509,416	-		Echvi_3780	0.67	+0.4
4,509,429	-		Echvi_3780	0.68	-1.3
4,509,429	-		Echvi_3780	0.68	+2.0
4,509,503	+		Echvi_3780	0.70	+1.0
4,509,504	-		Echvi_3780	0.70	+0.3
4,509,582	+		Echvi_3780	0.72	+0.3
4,509,582	+		Echvi_3780	0.72	-0.8
4,509,582	+		Echvi_3780	0.72	-2.2
4,509,583	-		Echvi_3780	0.72	+0.2
4,509,602	+		Echvi_3780	0.73	-0.7
4,509,663	-		Echvi_3780	0.74	+0.2
4,509,705	+		Echvi_3780	0.76	+1.9
4,509,799	+		Echvi_3780	0.78	-0.8
4,509,799	+		Echvi_3780	0.78	-0.2
4,509,799	+		Echvi_3780	0.78	-0.1
4,509,800	-		Echvi_3780	0.78	+0.4
4,509,800	-		Echvi_3780	0.78	-2.1
4,509,800	-		Echvi_3780	0.78	+1.0
4,509,877	+		Echvi_3780	0.81	+0.4
4,509,877	+				+0.9
4,509,877	+		Echvi_3780	0.81	-0.7
4,509,906	+		Echvi_3780	0.82	+0.6
4,509,906	+		Echvi_3780	0.82	-1.4
4,510,034	+		Echvi_3780	0.85	-0.7
4,510,150	+		Echvi_3780	0.89	-1.1
4,510,186	-		Echvi_3780	0.90	+0.3
4,510,186	-		Echvi_3780	0.90	+1.7
4,510,186	-		Echvi_3780	0.90	-0.4
4,510,240	+				+1.1
4,510,240	+				+1.0
4,510,241	-				-0.8
4,510,249	+				+0.3
4,510,249	+				+1.0
4,510,250	-				+0.9
4,510,250	-				-0.8
4,510,315	-				+0.6
4,510,429	-				-1.4
4,510,442	-				+0.8
4,510,475	+				-0.2
4,510,488	+				+1.6
4,510,489	-				+0.5
4,510,501	+				-0.2
4,510,501	+				-0.2
4,510,502	-				-0.2
4,510,533	+				-1.6
4,510,541	+				+0.3
4,510,675	+				-0.2
4,510,681	+				+0.8
4,510,686	+				+0.9
4,510,697	+				-0.1
4,510,697	+				-0.4
4,510,698	-				+0.1
4,510,719	+				-2.4
4,510,751	-				+1.3
4,510,854	+				-1.3
4,510,883	-				+0.4
4,510,940	+				-0.8
4,511,064	-		Echvi_3781	0.21	+1.3
4,511,151	+		Echvi_3781	0.30	-2.3
4,511,152	-		Echvi_3781	0.30	+1.0
4,511,265	+		Echvi_3781	0.40	-0.2
4,511,265	+		Echvi_3781	0.40	-1.3
4,511,273	+		Echvi_3781	0.41	-0.2
4,511,274	-		Echvi_3781	0.41	+0.3
4,511,358	-		Echvi_3781	0.49	+2.1
4,511,515	+		Echvi_3781	0.64	+0.4
4,511,515	+		Echvi_3781	0.64	-0.0
4,511,516	-		Echvi_3781	0.64	+1.1
4,511,516	-		Echvi_3781	0.64	-0.7
4,511,516	-		Echvi_3781	0.64	+0.7
4,511,517	+		Echvi_3781	0.64	-0.6
4,511,517	+		Echvi_3781	0.64	+0.3
4,511,518	-		Echvi_3781	0.64	+0.3