Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3742

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
4,456,256	+		Echvi_3741	0.12	-2.9
4,456,256	+		Echvi_3741	0.12	-1.0
4,456,257	-		Echvi_3741	0.13	-1.2
4,456,257	-		Echvi_3741	0.13	-0.4
4,456,259	+		Echvi_3741	0.13	-3.5
4,456,259	+		Echvi_3741	0.13	-2.0
4,456,259	+		Echvi_3741	0.13	-1.6
4,456,260	-		Echvi_3741	0.13	-0.2
4,456,260	-		Echvi_3741	0.13	-0.5
4,456,260	-		Echvi_3741	0.13	-1.1
4,456,281	+		Echvi_3741	0.15	-1.7
4,456,282	-		Echvi_3741	0.15	-0.9
4,456,318	+		Echvi_3741	0.18	-3.1
4,456,325	+		Echvi_3741	0.19	-0.2
4,456,331	+		Echvi_3741	0.19	-3.1
4,456,332	-		Echvi_3741	0.19	-2.1
4,456,332	-		Echvi_3741	0.19	-3.5
4,456,346	-		Echvi_3741	0.21	-1.2
4,456,346	-		Echvi_3741	0.21	+0.7
4,456,370	+				+1.3
4,456,488	+		Echvi_3741	0.33	-1.4
4,456,488	+		Echvi_3741	0.33	+0.1
4,456,489	-		Echvi_3741	0.34	-2.3
4,456,489	-		Echvi_3741	0.34	+1.3
4,456,490	+				+1.9
4,456,490	+		Echvi_3741	0.34	-1.9
4,456,490	+		Echvi_3741	0.34	-1.7
4,456,517	-		Echvi_3741	0.36	-1.4
4,456,522	+		Echvi_3741	0.36	-2.9
4,456,522	+		Echvi_3741	0.36	-0.4
4,456,523	-		Echvi_3741	0.37	-1.3
4,456,532	+		Echvi_3741	0.37	+0.2
4,456,717	-		Echvi_3741	0.54	-2.3
4,456,722	+		Echvi_3741	0.55	-2.2
4,456,743	-		Echvi_3741	0.56	-2.7
4,456,743	-		Echvi_3741	0.56	-0.7
4,456,800	+		Echvi_3741	0.62	-3.0
4,456,869	-		Echvi_3741	0.68	-1.4
4,456,920	+		Echvi_3741	0.72	-3.9
4,456,954	-		Echvi_3741	0.76	+1.9
4,456,954	-		Echvi_3741	0.76	+0.2
4,457,005	+		Echvi_3741	0.80	-0.3
4,457,006	-		Echvi_3741	0.80	-1.4
4,457,009	-		Echvi_3741	0.80	+0.3
4,457,009	-		Echvi_3741	0.80	+0.3
4,457,009	-		Echvi_3741	0.80	-1.6
4,457,009	-		Echvi_3741	0.80	-1.2
4,457,009	-		Echvi_3741	0.80	-1.3
4,457,009	-		Echvi_3741	0.80	-1.8
4,457,009	-		Echvi_3741	0.80	-0.7
4,457,009	-		Echvi_3741	0.80	-0.1
4,457,010	+		Echvi_3741	0.81	-0.4
4,457,011	-		Echvi_3741	0.81	-0.9
4,457,046	-		Echvi_3741	0.84	-0.4
4,457,108	-		Echvi_3741	0.89	-1.3
4,457,108	-		Echvi_3741	0.89	-1.7
4,457,108	-		Echvi_3741	0.89	-2.6
4,457,149	+				-3.1
4,457,149	+				-0.9
4,457,150	-				-2.6
4,457,237	+				-3.1
4,457,238	-				+0.3
4,457,239	+				-1.0
4,457,240	-				-2.5
4,457,248	+				-2.6
4,457,259	+				-2.1
4,457,292	-				-1.0
4,457,301	+				-1.6
4,457,301	+				-1.9
4,457,301	+				-1.1
4,457,308	+				-2.2
4,457,359	-				+1.3
4,457,374	+				-1.1
4,457,411	+		Echvi_3742	0.12	-2.3
4,457,411	+		Echvi_3742	0.12	-1.1
4,457,411	+		Echvi_3742	0.12	-3.0
4,457,411	+		Echvi_3742	0.12	-0.8
4,457,416	+		Echvi_3742	0.13	-2.1
4,457,416	+		Echvi_3742	0.13	-1.7
4,457,416	+		Echvi_3742	0.13	-1.9
4,457,417	-		Echvi_3742	0.13	+0.7
4,457,464	+		Echvi_3742	0.16	-1.9
4,457,487	+		Echvi_3742	0.18	-1.6
4,457,678	+		Echvi_3742	0.32	-0.9
4,457,696	-		Echvi_3742	0.34	-2.4
4,457,702	-		Echvi_3742	0.34	-0.9
4,457,718	-		Echvi_3742	0.35	-0.4
4,457,725	+		Echvi_3742	0.36	-1.2
4,457,725	+		Echvi_3742	0.36	-0.4
4,457,726	-		Echvi_3742	0.36	-2.1
4,457,726	-		Echvi_3742	0.36	-0.9
4,457,726	-		Echvi_3742	0.36	-1.5
4,457,825	+		Echvi_3742	0.43	-2.0
4,457,856	+		Echvi_3742	0.46	-2.0
4,457,856	+		Echvi_3742	0.46	-2.3
4,457,856	+		Echvi_3742	0.46	-2.7
4,457,863	+		Echvi_3742	0.46	-1.9
4,457,863	+		Echvi_3742	0.46	-1.2
4,457,864	-		Echvi_3742	0.46	-0.0
4,457,915	-		Echvi_3742	0.50	-0.9
4,457,954	+		Echvi_3742	0.53	-1.4
4,457,955	-		Echvi_3742	0.53	-0.7
4,458,046	+		Echvi_3742	0.60	-0.6
4,458,047	-		Echvi_3742	0.60	-1.3
4,458,116	-		Echvi_3742	0.65	-2.0
4,458,116	-		Echvi_3742	0.65	+0.3
4,458,116	-		Echvi_3742	0.65	+1.9
4,458,190	+		Echvi_3742	0.71	-1.6
4,458,190	+		Echvi_3742	0.71	-1.5
4,458,213	+		Echvi_3742	0.72	-1.6
4,458,214	-		Echvi_3742	0.72	-1.3
4,458,243	+		Echvi_3742	0.75	-2.1
4,458,267	-		Echvi_3742	0.76	-0.4
4,458,285	-		Echvi_3742	0.78	-1.7
4,458,316	-		Echvi_3742	0.80	-0.9
4,458,316	-		Echvi_3742	0.80	-0.7
4,458,451	+				-1.8
4,458,452	-				+1.0
4,458,458	+				-1.4
4,458,458	+				-2.5
4,458,458	+				-1.1
4,458,480	+				-1.9
4,458,514	+				+0.5
4,458,535	-				-4.1
4,458,555	+				-2.6
4,458,555	+				-3.6
4,458,555	+				-4.1
4,458,605	-				+2.0
4,458,605	-				+1.4
4,458,608	+				-3.3
4,458,609	-				+3.2
4,458,616	+				-2.8
4,458,617	-				+3.2
4,458,617	-				+4.2
4,458,620	+				-2.1
4,458,706	+				+0.6
4,458,707	-				+5.1
4,458,785	+		Echvi_3743	0.16	-1.2
4,458,785	+		Echvi_3743	0.16	-2.1
4,458,870	-		Echvi_3743	0.31	+4.8
4,458,996	+		Echvi_3743	0.53	+0.1
4,459,094	+		Echvi_3743	0.70	-1.5
4,459,098	+		Echvi_3743	0.71	-1.2
4,459,098	+		Echvi_3743	0.71	+0.1
4,459,098	+		Echvi_3743	0.71	-0.8
4,459,098	+		Echvi_3743	0.71	-0.3
4,459,098	+		Echvi_3743	0.71	-1.3
4,459,098	+		Echvi_3743	0.71	+0.3
4,459,098	+		Echvi_3743	0.71	-1.7
4,459,098	+		Echvi_3743	0.71	-0.7
4,459,098	+		Echvi_3743	0.71	-3.3
4,459,098	+		Echvi_3743	0.71	-2.7
4,459,099	-		Echvi_3743	0.71	+5.2
4,459,099	-		Echvi_3743	0.71	+5.8
4,459,099	-		Echvi_3743	0.71	+4.6
4,459,099	-		Echvi_3743	0.71	+4.5
4,459,099	-		Echvi_3743	0.71	+4.6
4,459,099	-		Echvi_3743	0.71	+5.1
4,459,244	+				-3.4
4,459,258	+				-1.2
4,459,259	-				+5.1
4,459,346	-				+5.1
4,459,365	+				-0.6
4,459,414	-				+4.9
4,459,416	-				+5.1
4,459,445	+				-1.3
4,459,446	-				+5.2
4,459,471	+				+0.1
4,459,484	-				+4.4
4,459,535	+				-1.3
4,459,548	+				-1.7
4,459,549	-				+4.6
4,459,549	-				+4.4
4,459,549	-				+4.6
4,459,557	+				-1.1
4,459,557	+				-0.6
4,459,558	-				+5.1
4,459,558	-				+4.3
4,459,578	+				-1.5
4,459,579	-				+4.3
4,459,579	-				+3.9
4,459,579	-				+4.4