Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3723

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
4,427,616	-		Echvi_3721	0.83	-2.1
4,427,677	-				-3.2
4,427,681	+				-0.8
4,427,681	+				+1.9
4,427,744	-				+0.6
4,427,744	-				-1.8
4,427,744	-				+0.0
4,427,898	+				+0.6
4,428,047	-		Echvi_3722	0.34	-0.2
4,428,047	-		Echvi_3722	0.34	-1.4
4,428,090	+		Echvi_3722	0.42	+0.3
4,428,090	+		Echvi_3722	0.42	-1.6
4,428,091	-		Echvi_3722	0.42	+0.8
4,428,115	+		Echvi_3722	0.46	+0.2
4,428,116	-		Echvi_3722	0.46	-2.4
4,428,135	-		Echvi_3722	0.50	+0.2
4,428,170	-		Echvi_3722	0.56	+0.1
4,428,280	-		Echvi_3722	0.77	+0.3
4,428,490	+				+0.3
4,428,490	+				-1.6
4,428,491	-				+0.3
4,428,491	-				+1.3
4,428,495	-				-0.6
4,428,495	-				+1.9
4,428,522	-				-0.4
4,428,536	-				-0.7
4,428,623	+				-1.3
4,428,624	-				-3.0
4,428,657	+		Echvi_3723	0.14	+1.7
4,428,659	-		Echvi_3723	0.14	-0.7
4,428,659	-		Echvi_3723	0.14	-2.4
4,428,777	+		Echvi_3723	0.35	-0.4
4,428,842	-		Echvi_3723	0.46	-0.3
4,428,942	-		Echvi_3723	0.64	-1.3
4,429,021	-		Echvi_3723	0.78	-1.4
4,429,078	+		Echvi_3723	0.88	-2.1
4,429,139	+				+0.0
4,429,140	-				-1.4
4,429,174	+				+0.6
4,429,194	-		Echvi_3724	0.12	+0.1
4,429,206	+		Echvi_3724	0.16	+0.4
4,429,260	+		Echvi_3724	0.32	+0.9
4,429,291	-		Echvi_3724	0.42	-3.1
4,429,291	-		Echvi_3724	0.42	-0.4
4,429,320	-		Echvi_3724	0.51	-1.1
4,429,326	+		Echvi_3724	0.53	+0.1
4,429,326	+		Echvi_3724	0.53	+0.6
4,429,326	+		Echvi_3724	0.53	+0.2
4,429,327	-		Echvi_3724	0.53	-0.9
4,429,330	+		Echvi_3724	0.54	+0.7
4,429,330	+		Echvi_3724	0.54	-1.7
4,429,330	+		Echvi_3724	0.54	-0.2
4,429,330	+		Echvi_3724	0.54	-0.3
4,429,330	+		Echvi_3724	0.54	+0.3
4,429,330	+		Echvi_3724	0.54	+0.2
4,429,331	-		Echvi_3724	0.54	+0.0
4,429,331	-		Echvi_3724	0.54	-0.2
4,429,331	-		Echvi_3724	0.54	-1.0
4,429,331	-		Echvi_3724	0.54	-0.7
4,429,331	-		Echvi_3724	0.54	+0.4
4,429,331	-		Echvi_3724	0.54	+0.3
4,429,331	-		Echvi_3724	0.54	-0.1
4,429,331	-		Echvi_3724	0.54	-2.0
4,429,331	-		Echvi_3724	0.54	-0.3
4,429,332	+		Echvi_3724	0.55	+1.0
4,429,332	+		Echvi_3724	0.55	-0.2
4,429,333	-		Echvi_3724	0.55	+0.9
4,429,333	-		Echvi_3724	0.55	+0.3
4,429,333	-		Echvi_3724	0.55	-0.5
4,429,333	-		Echvi_3724	0.55	-0.8
4,429,361	+		Echvi_3724	0.64	-0.8
4,429,384	+		Echvi_3724	0.71	-1.0
4,429,384	+		Echvi_3724	0.71	-0.9
4,429,384	+		Echvi_3724	0.71	-0.3
4,429,406	-		Echvi_3724	0.77	-0.4
4,429,426	+		Echvi_3724	0.84	+1.5
4,429,427	-		Echvi_3724	0.84	-0.0
4,429,477	-				+0.1
4,429,498	+				-1.7
4,429,499	-				+2.4
4,429,519	+				-0.4
4,429,519	+				+0.4
4,429,519	+				-0.1
4,429,519	+				-1.3
4,429,519	+				+0.3
4,429,519	+				+0.9
4,429,519	+				-0.9
4,429,519	+				-0.4
4,429,520	-				-0.4
4,429,520	-				+0.5
4,429,520	-				-0.3
4,429,520	-				-0.3
4,429,520	-				+0.2
4,429,520	-				+0.3
4,429,520	-				+0.6
4,429,520	-				-0.1
4,429,523	+				-0.7
4,429,554	+				-0.1
4,429,593	-				-0.2
4,429,594	+				+0.7
4,429,595	-				-1.2
4,429,595	-				-0.1
4,429,605	+		Echvi_3725	0.10	+1.1
4,429,631	+		Echvi_3725	0.13	+0.5
4,429,632	-		Echvi_3725	0.13	-0.7
4,429,632	-		Echvi_3725	0.13	-0.6
4,429,703	+		Echvi_3725	0.20	+0.5
4,429,705	+		Echvi_3725	0.20	+0.8
4,429,705	+		Echvi_3725	0.20	-0.4
4,429,705	+		Echvi_3725	0.20	-0.4
4,429,706	-		Echvi_3725	0.20	-2.6
4,429,722	-		Echvi_3725	0.22	+0.7
4,429,769	+		Echvi_3725	0.27	+0.8
4,429,769	+		Echvi_3725	0.27	-0.5
4,429,769	+		Echvi_3725	0.27	-0.4
4,429,769	+		Echvi_3725	0.27	-1.3
4,429,769	+		Echvi_3725	0.27	-1.9
4,429,770	-		Echvi_3725	0.27	-1.7
4,429,792	+		Echvi_3725	0.29	+0.5
4,429,792	+		Echvi_3725	0.29	+0.6
4,429,793	-		Echvi_3725	0.29	-2.3
4,429,793	-		Echvi_3725	0.29	-2.6
4,429,944	+		Echvi_3725	0.44	+0.6
4,429,944	+		Echvi_3725	0.44	+0.6
4,429,944	+		Echvi_3725	0.44	-0.1
4,430,006	-		Echvi_3725	0.50	-2.2
4,430,012	-		Echvi_3725	0.50	-0.1