Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3721

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
4,426,130	+				-1.3
4,426,160	-				+0.9
4,426,164	-				-0.8
4,426,164	-				+0.5
4,426,164	-				-0.5
4,426,164	-				-0.4
4,426,164	-				+0.1
4,426,176	+				-0.6
4,426,176	+				-0.6
4,426,177	-				-2.1
4,426,187	+				+2.5
4,426,188	-				-0.2
4,426,207	-				-0.7
4,426,220	+				+0.8
4,426,220	+				-0.5
4,426,221	-				+0.2
4,426,224	+				+1.0
4,426,224	+				-1.5
4,426,225	-				+0.4
4,426,234	+				-0.9
4,426,242	-				+0.4
4,426,242	-				-1.0
4,426,274	+				-1.4
4,426,275	-				-1.6
4,426,275	-				-0.6
4,426,292	+				+0.1
4,426,293	-				-0.1
4,427,004	-				-0.6
4,427,063	+				-1.0
4,427,063	+				-0.1
4,427,064	-				+0.9
4,427,087	+				-0.7
4,427,091	+				-1.9
4,427,091	+				-0.8
4,427,091	+				+1.9
4,427,091	+				-2.8
4,427,092	-				-2.0
4,427,092	-				-0.9
4,427,092	-				-0.7
4,427,122	+				-2.2
4,427,226	+		Echvi_3721	0.24	-0.4
4,427,227	-		Echvi_3721	0.24	-2.5
4,427,227	-		Echvi_3721	0.24	-2.6
4,427,279	+		Echvi_3721	0.32	-2.9
4,427,374	-		Echvi_3721	0.46	-0.4
4,427,377	+		Echvi_3721	0.47	-0.6
4,427,377	+		Echvi_3721	0.47	+0.2
4,427,392	+		Echvi_3721	0.49	-1.1
4,427,393	-		Echvi_3721	0.49	-2.0
4,427,393	-		Echvi_3721	0.49	-0.2
4,427,472	+		Echvi_3721	0.61	-3.2
4,427,616	-		Echvi_3721	0.83	-2.1
4,427,677	-				-3.2
4,427,681	+				-0.8
4,427,681	+				+1.9
4,427,744	-				+0.6
4,427,744	-				-1.8
4,427,744	-				+0.0
4,427,898	+				+0.6
4,428,047	-		Echvi_3722	0.34	-0.2
4,428,047	-		Echvi_3722	0.34	-1.4
4,428,090	+		Echvi_3722	0.42	+0.3
4,428,090	+		Echvi_3722	0.42	-1.6
4,428,091	-		Echvi_3722	0.42	+0.8
4,428,115	+		Echvi_3722	0.46	+0.2
4,428,116	-		Echvi_3722	0.46	-2.4
4,428,135	-		Echvi_3722	0.50	+0.2
4,428,170	-		Echvi_3722	0.56	+0.1
4,428,280	-		Echvi_3722	0.77	+0.3
4,428,490	+				+0.3
4,428,490	+				-1.6
4,428,491	-				+0.3
4,428,491	-				+1.3
4,428,495	-				-0.6
4,428,495	-				+1.9
4,428,522	-				-0.4
4,428,536	-				-0.7
4,428,623	+				-1.3
4,428,624	-				-3.0
4,428,657	+		Echvi_3723	0.14	+1.7
4,428,659	-		Echvi_3723	0.14	-0.7
4,428,659	-		Echvi_3723	0.14	-2.4