Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3473

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
4,110,975	+				-1.3
4,110,976	-				-1.5
4,110,976	-				+3.5
4,110,979	+				-0.4
4,110,983	+				+0.0
4,111,000	+				-2.6
4,111,058	+				+0.5
4,111,058	+				-1.4
4,111,127	+		Echvi_3472	0.16	+0.9
4,111,127	+		Echvi_3472	0.16	+2.7
4,111,127	+		Echvi_3472	0.16	-0.1
4,111,128	-		Echvi_3472	0.16	-0.6
4,111,128	-		Echvi_3472	0.16	+0.2
4,111,129	+		Echvi_3472	0.16	+0.3
4,111,130	-		Echvi_3472	0.16	+1.0
4,111,130	-		Echvi_3472	0.16	-1.0
4,111,206	+		Echvi_3472	0.25	+1.3
4,111,220	-		Echvi_3472	0.27	+0.7
4,111,289	+		Echvi_3472	0.35	+0.4
4,111,363	-		Echvi_3472	0.44	-0.2
4,111,384	-		Echvi_3472	0.47	-0.5
4,111,469	+		Echvi_3472	0.57	+0.2
4,111,484	-		Echvi_3472	0.59	-2.5
4,111,488	+		Echvi_3472	0.59	+0.3
4,111,488	+		Echvi_3472	0.59	-2.3
4,111,488	+		Echvi_3472	0.59	+1.9
4,111,488	+		Echvi_3472	0.59	+0.2
4,111,489	-		Echvi_3472	0.59	-1.8
4,111,489	-		Echvi_3472	0.59	+0.6
4,111,640	+		Echvi_3472	0.77	-1.0
4,111,641	-		Echvi_3472	0.77	+0.4
4,111,641	-		Echvi_3472	0.77	-0.5
4,111,647	+		Echvi_3472	0.78	-0.5
4,111,668	+		Echvi_3472	0.81	-0.1
4,111,669	-		Echvi_3472	0.81	-0.8
4,111,669	-		Echvi_3472	0.81	-0.1
4,111,689	-		Echvi_3472	0.83	-1.6
4,111,726	+		Echvi_3472	0.88	+1.2
4,111,787	+				+0.3
4,111,788	-				+1.4
4,111,788	-				-0.1
4,111,788	-				-0.2
4,111,827	-				-0.6
4,111,827	-				-0.1
4,111,835	+				+0.9
4,111,836	-				+1.5
4,111,841	+				-0.5
4,111,841	+				+0.4
4,111,842	-				-0.3
4,111,842	-				-0.3
4,111,843	+				+0.7
4,111,844	-				+0.8
4,111,844	-				+0.2
4,111,935	-				-1.3
4,111,943	+				+0.0
4,112,040	+		Echvi_3473	0.14	-0.0
4,112,067	+		Echvi_3473	0.17	-1.1
4,112,067	+		Echvi_3473	0.17	-0.4
4,112,067	+		Echvi_3473	0.17	+0.5
4,112,067	+		Echvi_3473	0.17	-0.3
4,112,068	-		Echvi_3473	0.17	+2.6
4,112,145	+		Echvi_3473	0.28	-0.4
4,112,145	+		Echvi_3473	0.28	-0.6
4,112,148	-		Echvi_3473	0.28	+0.8
4,112,162	+		Echvi_3473	0.30	-1.1
4,112,167	+		Echvi_3473	0.31	+1.9
4,112,168	-		Echvi_3473	0.31	-0.4
4,112,168	-		Echvi_3473	0.31	-1.0
4,112,168	-		Echvi_3473	0.31	-0.2
4,112,211	+		Echvi_3473	0.37	-2.9
4,112,211	+		Echvi_3473	0.37	-1.4
4,112,212	-		Echvi_3473	0.37	+0.2
4,112,212	-		Echvi_3473	0.37	+0.2
4,112,332	+		Echvi_3473	0.54	-0.6
4,112,454	+		Echvi_3473	0.71	+1.9
4,112,468	+		Echvi_3473	0.73	+0.6
4,112,469	-		Echvi_3473	0.73	+0.2
4,112,622	+				-0.9
4,112,623	-				+1.1
4,112,696	+				+1.2
4,112,700	-				-0.1
4,112,700	-				+0.3
4,112,700	-				+0.7
4,112,705	+				+0.2
4,112,705	+				-1.5
4,112,712	-				-1.3
4,112,737	-				-0.6
4,112,737	-				+1.1
4,112,830	+				-1.8
4,112,830	+				+1.5
4,112,830	+				-0.8
4,112,830	+				+0.6
4,112,831	-				+2.4
4,112,831	-				-1.3
4,112,843	+				-0.3
4,112,843	+				-0.6
4,112,886	-				-0.4
4,112,920	-				-1.0
4,112,939	+				-1.1
4,112,940	-				+0.6
4,112,943	+				+0.4
4,112,943	+				+0.9
4,112,944	-				-1.0
4,112,958	+				-0.6
4,112,959	-				+1.9
4,112,961	+				+2.2
4,112,962	-				+0.6
4,112,962	-				-0.8
4,112,962	-				+0.8
4,112,963	+				-0.6
4,112,964	-				-1.4
4,113,009	+				-0.1
4,113,053	+		Echvi_3474	0.10	-2.1
4,113,054	-		Echvi_3474	0.10	+0.8
4,113,054	-		Echvi_3474	0.10	-0.4
4,113,054	-		Echvi_3474	0.10	-1.7
4,113,054	-		Echvi_3474	0.10	+1.4
4,113,057	-		Echvi_3474	0.11	-0.2
4,113,060	+		Echvi_3474	0.11	-1.1
4,113,116	+		Echvi_3474	0.19	+0.1
4,113,129	-		Echvi_3474	0.21	+0.2
4,113,133	+		Echvi_3474	0.21	-0.4
4,113,133	+		Echvi_3474	0.21	-0.4
4,113,133	+		Echvi_3474	0.21	+0.7
4,113,134	-		Echvi_3474	0.21	-0.1
4,113,138	+		Echvi_3474	0.22	-0.8
4,113,138	+		Echvi_3474	0.22	-0.1
4,113,139	-		Echvi_3474	0.22	+2.0
4,113,139	-		Echvi_3474	0.22	-0.0
4,113,139	-		Echvi_3474	0.22	+0.8
4,113,143	+		Echvi_3474	0.22	-0.5
4,113,143	+		Echvi_3474	0.22	-2.6
4,113,143	+		Echvi_3474	0.22	-3.2
4,113,144	-		Echvi_3474	0.23	-0.2
4,113,152	+		Echvi_3474	0.24	-0.1
4,113,153	-		Echvi_3474	0.24	+0.2
4,113,170	-		Echvi_3474	0.26	+0.3
4,113,185	-		Echvi_3474	0.28	+1.6
4,113,185	-		Echvi_3474	0.28	+0.7
4,113,195	+		Echvi_3474	0.29	-0.2
4,113,196	-		Echvi_3474	0.30	-1.5
4,113,335	+		Echvi_3474	0.48	+0.4
4,113,336	-		Echvi_3474	0.48	-0.1
4,113,344	+		Echvi_3474	0.50	-0.8
4,113,398	+		Echvi_3474	0.57	-0.1
4,113,399	-		Echvi_3474	0.57	-2.0
4,113,429	+		Echvi_3474	0.61	-0.2
4,113,430	-		Echvi_3474	0.61	+1.9
4,113,432	-		Echvi_3474	0.61	-1.4
4,113,466	+		Echvi_3474	0.66	+3.2
4,113,466	+		Echvi_3474	0.66	-2.9
4,113,489	+		Echvi_3474	0.69	+1.4
4,113,539	-		Echvi_3474	0.76	+1.2
4,113,544	+		Echvi_3474	0.77	+0.0
4,113,590	-		Echvi_3474	0.83	+0.9
4,113,595	-		Echvi_3474	0.83	-0.4
4,113,595	-		Echvi_3474	0.83	+0.0
4,113,630	+				+0.3
4,113,640	-		Echvi_3474	0.89	-0.3
4,113,645	+				-0.6
4,113,646	-				-0.5