Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3406

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
4,029,048	-		Echvi_3404	0.70	+1.1
4,029,059	+		Echvi_3404	0.70	+1.4
4,029,061	+		Echvi_3404	0.70	+1.0
4,029,062	-		Echvi_3404	0.70	+1.9
4,029,108	+		Echvi_3404	0.73	-0.2
4,029,135	+		Echvi_3404	0.74	-0.5
4,029,138	+		Echvi_3404	0.74	-0.3
4,029,150	+		Echvi_3404	0.75	-2.3
4,029,156	+		Echvi_3404	0.75	+0.8
4,029,162	+		Echvi_3404	0.75	+0.5
4,029,163	-		Echvi_3404	0.75	+0.3
4,029,163	-		Echvi_3404	0.75	-1.4
4,029,163	-		Echvi_3404	0.75	+0.4
4,029,163	-		Echvi_3404	0.75	+1.3
4,029,225	+		Echvi_3404	0.78	+0.1
4,029,226	-		Echvi_3404	0.78	-0.4
4,029,226	-		Echvi_3404	0.78	-0.7
4,029,229	+				+1.5
4,029,229	+		Echvi_3404	0.79	-0.2
4,029,230	-		Echvi_3404	0.79	-0.6
4,029,250	-		Echvi_3404	0.80	+0.1
4,029,299	-		Echvi_3404	0.82	+0.9
4,029,311	+		Echvi_3404	0.83	+0.3
4,029,342	+		Echvi_3404	0.84	+0.4
4,029,363	+		Echvi_3404	0.85	+0.1
4,029,364	-		Echvi_3404	0.85	-0.0
4,029,364	-		Echvi_3404	0.85	-0.5
4,029,369	-		Echvi_3404	0.85	-0.2
4,029,369	-		Echvi_3404	0.85	-0.8
4,029,370	+		Echvi_3404	0.85	-0.2
4,029,370	+		Echvi_3404	0.85	+0.9
4,029,371	-		Echvi_3404	0.85	-0.3
4,029,388	+		Echvi_3404	0.86	+1.6
4,029,411	-		Echvi_3404	0.87	+1.2
4,029,450	-		Echvi_3404	0.89	-1.3
4,029,450	-		Echvi_3404	0.89	-0.3
4,029,525	-				-0.3
4,029,525	-				-1.5
4,029,525	-				-1.4
4,029,533	-				-0.7
4,029,565	+				+1.9
4,029,619	-				+0.8
4,029,674	-				+0.4
4,029,674	-				-0.0
4,029,677	-				+0.5
4,029,905	-				-0.9
4,030,057	+				-1.8
4,030,060	+				+1.1
4,030,060	+				+0.3
4,030,060	+				+0.7
4,030,060	+				+0.9
4,030,146	-				+0.3
4,030,146	-				-1.0
4,030,146	-				+0.1
4,030,166	+				+1.6
4,030,186	-				+1.4
4,030,243	-				-0.4
4,030,243	-				+0.1
4,030,245	-				-1.3
4,030,253	+				+1.1
4,030,289	+		Echvi_3406	0.11	+0.4
4,030,290	-		Echvi_3406	0.11	-0.9
4,030,290	-		Echvi_3406	0.11	-0.4
4,030,290	-		Echvi_3406	0.11	-0.5
4,030,292	-		Echvi_3406	0.11	-0.6
4,030,320	-		Echvi_3406	0.12	-2.0
4,030,336	+		Echvi_3406	0.12	-0.7
4,030,393	-		Echvi_3406	0.15	-0.8
4,030,394	+		Echvi_3406	0.15	-1.1
4,030,394	+		Echvi_3406	0.15	-0.7
4,030,439	-		Echvi_3406	0.17	+1.9
4,030,442	-		Echvi_3406	0.17	+1.0
4,030,442	-		Echvi_3406	0.17	-0.5
4,030,506	-		Echvi_3406	0.20	-0.9
4,030,567	+		Echvi_3406	0.22	+0.0
4,030,568	-		Echvi_3406	0.22	-0.5
4,030,568	-		Echvi_3406	0.22	+1.9
4,030,658	+		Echvi_3406	0.26	+0.2
4,030,659	-		Echvi_3406	0.26	+1.4
4,030,659	-		Echvi_3406	0.26	-0.6
4,030,659	-		Echvi_3406	0.26	-0.2
4,030,707	-		Echvi_3406	0.28	-0.4
4,030,734	-		Echvi_3406	0.29	+1.1
4,030,737	+		Echvi_3406	0.29	+0.6
4,030,737	+		Echvi_3406	0.29	+0.5
4,030,737	+		Echvi_3406	0.29	+0.3
4,030,738	-		Echvi_3406	0.30	-0.2
4,030,740	-		Echvi_3406	0.30	+0.9
4,030,783	+		Echvi_3406	0.31	-0.1
4,030,844	-		Echvi_3406	0.34	+1.9
4,030,864	+		Echvi_3406	0.35	+0.1
4,030,865	-		Echvi_3406	0.35	+2.5
4,030,911	+		Echvi_3406	0.37	+0.6
4,030,914	-		Echvi_3406	0.37	-0.2
4,030,961	-		Echvi_3406	0.39	+0.3
4,030,989	+		Echvi_3406	0.40	-0.7
4,030,989	+		Echvi_3406	0.40	-0.7
4,030,990	-		Echvi_3406	0.40	-0.8
4,030,990	-		Echvi_3406	0.40	-0.3
4,030,990	-		Echvi_3406	0.40	-0.1
4,030,996	-		Echvi_3406	0.40	-1.2
4,030,996	-		Echvi_3406	0.40	+0.1
4,031,009	+		Echvi_3406	0.41	+0.5
4,031,010	-		Echvi_3406	0.41	-0.1
4,031,010	-		Echvi_3406	0.41	+0.6
4,031,010	-		Echvi_3406	0.41	-0.6
4,031,010	-		Echvi_3406	0.41	+1.3
4,031,031	+		Echvi_3406	0.42	+1.1
4,031,032	-		Echvi_3406	0.42	+0.2
4,031,053	-		Echvi_3406	0.43	+1.3
4,031,062	-		Echvi_3406	0.43	+2.2
4,031,120	+		Echvi_3406	0.46	-1.3
4,031,121	-		Echvi_3406	0.46	-0.3
4,031,138	-		Echvi_3406	0.46	+0.9
4,031,138	-		Echvi_3406	0.46	+0.8
4,031,184	+		Echvi_3406	0.48	+2.4
4,031,213	+		Echvi_3406	0.50	+0.0
4,031,214	-		Echvi_3406	0.50	-1.8
4,031,230	+		Echvi_3406	0.50	+0.0
4,031,231	-		Echvi_3406	0.50	-0.1
4,031,231	-		Echvi_3406	0.50	-2.1
4,031,257	-		Echvi_3406	0.52	-1.1
4,031,380	-		Echvi_3406	0.57	+1.9
4,031,381	+		Echvi_3406	0.57	-0.4
4,031,541	+		Echvi_3406	0.64	+2.4
4,031,542	-		Echvi_3406	0.64	+0.6
4,031,554	-		Echvi_3406	0.64	-0.1
4,031,597	-		Echvi_3406	0.66	-0.8
4,031,613	+		Echvi_3406	0.67	+1.2
4,031,614	-		Echvi_3406	0.67	-1.2
4,031,615	+		Echvi_3406	0.67	-0.6
4,031,615	+		Echvi_3406	0.67	+0.1
4,031,615	+		Echvi_3406	0.67	+0.6
4,031,616	-		Echvi_3406	0.67	-0.1
4,031,616	-		Echvi_3406	0.67	+0.3
4,031,619	+		Echvi_3406	0.67	+2.2
4,031,619	+		Echvi_3406	0.67	-1.2
4,031,620	-		Echvi_3406	0.67	+1.3
4,031,620	-		Echvi_3406	0.67	+0.1
4,031,620	-		Echvi_3406	0.67	-0.4
4,031,620	-		Echvi_3406	0.67	+0.1
4,031,620	-		Echvi_3406	0.67	+0.2
4,031,620	-		Echvi_3406	0.67	-0.7
4,031,620	-		Echvi_3406	0.67	+1.9
4,031,620	-		Echvi_3406	0.67	-1.7
4,031,814	-		Echvi_3406	0.75	-0.9
4,031,964	-		Echvi_3406	0.81	+0.1
4,031,976	-		Echvi_3406	0.82	-0.9
4,032,004	-		Echvi_3406	0.83	-0.7
4,032,004	-		Echvi_3406	0.83	+0.5
4,032,011	+		Echvi_3406	0.83	-0.4
4,032,115	-		Echvi_3406	0.88	-0.7
4,032,290	-				+0.8
4,032,340	-				+1.2
4,032,340	-				-0.3
4,032,343	-				+3.7
4,032,346	-				-0.5
4,032,346	-				+1.9
4,032,349	-				+1.0
4,032,381	-				+0.3
4,032,386	-				+0.3
4,032,469	-				-1.0
4,032,527	-				-0.0
4,032,591	-				+1.0
4,032,591	-				-0.4
4,032,660	+		Echvi_3407	0.23	-1.2
4,032,671	+		Echvi_3407	0.27	+2.5
4,032,672	-		Echvi_3407	0.27	+0.6
4,032,695	-		Echvi_3407	0.34	+0.3
4,032,725	+		Echvi_3407	0.44	+0.1
4,032,728	-		Echvi_3407	0.44	+0.7
4,032,729	+		Echvi_3407	0.45	-0.9
4,032,729	+		Echvi_3407	0.45	+1.5
4,032,730	-		Echvi_3407	0.45	-0.7
4,032,730	-		Echvi_3407	0.45	-1.7
4,032,805	+		Echvi_3407	0.68	+0.1
4,032,806	-		Echvi_3407	0.69	+0.2
4,032,864	-		Echvi_3407	0.86	-0.4
4,032,864	-		Echvi_3407	0.86	-0.9
4,032,905	+				-0.0
4,032,915	+				-0.9
4,032,954	+				+1.3
4,032,955	-				+2.2
4,032,969	+				+0.3
4,033,073	+		Echvi_3408	0.20	+1.0
4,033,109	+		Echvi_3408	0.25	+1.0
4,033,110	-		Echvi_3408	0.25	-0.1
4,033,135	-		Echvi_3408	0.28	+0.6
4,033,193	+		Echvi_3408	0.37	-0.4
4,033,205	+		Echvi_3408	0.38	-0.7
4,033,309	-		Echvi_3408	0.53	-0.5
4,033,309	-		Echvi_3408	0.53	+0.6
4,033,309	-		Echvi_3408	0.53	-1.6
4,033,334	-		Echvi_3408	0.56	-1.8
4,033,349	-		Echvi_3408	0.58	+0.5