Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3363

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
3,968,636	-		Echvi_3361	0.70	-0.1
3,968,636	-		Echvi_3361	0.70	+0.1
3,968,638	+		Echvi_3361	0.71	+0.1
3,968,639	-		Echvi_3361	0.71	+1.0
3,968,669	-		Echvi_3361	0.75	-0.0
3,968,691	-		Echvi_3361	0.77	+1.1
3,968,692	+		Echvi_3361	0.77	+0.1
3,968,699	+		Echvi_3361	0.78	-1.1
3,968,700	-		Echvi_3361	0.78	-1.7
3,968,701	+		Echvi_3361	0.79	-0.4
3,968,713	+		Echvi_3361	0.80	+1.5
3,968,785	+		Echvi_3361	0.89	+0.5
3,968,821	+				+0.2
3,968,822	-				+0.6
3,968,824	+				+0.6
3,968,825	-				-1.0
3,968,828	+				-0.9
3,968,829	-				-0.9
3,968,829	-				+0.1
3,968,829	-				+1.3
3,968,851	-				+1.9
3,968,890	+				+1.2
3,968,984	+		Echvi_3362	0.18	+1.1
3,969,004	+		Echvi_3362	0.22	+1.1
3,969,004	+		Echvi_3362	0.22	+1.2
3,969,004	+		Echvi_3362	0.22	+1.3
3,969,005	-		Echvi_3362	0.22	-2.0
3,969,005	-		Echvi_3362	0.22	+1.1
3,969,005	-		Echvi_3362	0.22	+1.5
3,969,007	-		Echvi_3362	0.22	+0.8
3,969,007	-		Echvi_3362	0.22	+0.7
3,969,024	+		Echvi_3362	0.25	+0.0
3,969,024	+		Echvi_3362	0.25	+0.5
3,969,026	+		Echvi_3362	0.26	+1.7
3,969,027	-		Echvi_3362	0.26	+0.2
3,969,027	-		Echvi_3362	0.26	+2.1
3,969,068	+		Echvi_3362	0.33	+0.3
3,969,069	-		Echvi_3362	0.33	+1.6
3,969,069	-		Echvi_3362	0.33	+0.5
3,969,069	-		Echvi_3362	0.33	+0.9
3,969,093	-		Echvi_3362	0.38	-0.9
3,969,156	+		Echvi_3362	0.49	+0.2
3,969,173	-		Echvi_3362	0.52	+0.9
3,969,173	-		Echvi_3362	0.52	+0.1
3,969,173	-		Echvi_3362	0.52	-0.4
3,969,348	+		Echvi_3362	0.83	+0.1
3,969,354	-		Echvi_3362	0.84	+0.7
3,969,398	+				+1.5
3,969,448	-				-0.0
3,969,501	-				-0.1
3,969,527	+				-0.2
3,969,563	-				+0.3
3,969,626	+				+0.3
3,969,626	+				+0.3
3,969,626	+				+0.4
3,969,627	-				+0.7
3,969,668	-				-2.2
3,969,733	-		Echvi_3363	0.11	-0.8
3,969,742	+		Echvi_3363	0.12	-1.2
3,969,757	+		Echvi_3363	0.14	+1.1
3,969,777	-		Echvi_3363	0.16	-0.5
3,969,797	+		Echvi_3363	0.18	+1.3
3,969,809	+		Echvi_3363	0.20	+0.1
3,969,809	+		Echvi_3363	0.20	+0.4
3,969,820	+		Echvi_3363	0.21	-0.4
3,969,820	+		Echvi_3363	0.21	+0.2
3,969,820	+		Echvi_3363	0.21	+2.4
3,969,863	+		Echvi_3363	0.25	-0.2
3,969,864	-		Echvi_3363	0.25	-0.8
3,969,864	-		Echvi_3363	0.25	-0.9
3,969,864	-		Echvi_3363	0.25	-1.9
3,969,882	+		Echvi_3363	0.27	+0.3
3,969,882	+		Echvi_3363	0.27	+0.8
3,969,884	+		Echvi_3363	0.28	+0.8
3,969,885	-		Echvi_3363	0.28	+0.8
3,969,954	-		Echvi_3363	0.35	-0.2
3,969,986	+		Echvi_3363	0.39	-0.4
3,970,029	-		Echvi_3363	0.43	+1.0
3,970,032	-		Echvi_3363	0.44	+1.9
3,970,118	+		Echvi_3363	0.53	+0.3
3,970,118	+		Echvi_3363	0.53	-0.6
3,970,119	-		Echvi_3363	0.53	-0.4
3,970,167	-		Echvi_3363	0.58	-0.7
3,970,216	+		Echvi_3363	0.63	-0.1
3,970,232	-		Echvi_3363	0.65	+0.2
3,970,243	+		Echvi_3363	0.66	-1.7
3,970,243	+		Echvi_3363	0.66	-1.4
3,970,243	+		Echvi_3363	0.66	+1.4
3,970,244	-		Echvi_3363	0.66	+0.7
3,970,244	-		Echvi_3363	0.66	+0.1
3,970,244	-		Echvi_3363	0.66	+1.1
3,970,246	+		Echvi_3363	0.67	+0.1
3,970,246	+		Echvi_3363	0.67	+2.1
3,970,247	-		Echvi_3363	0.67	-3.4
3,970,323	+		Echvi_3363	0.75	-0.9
3,970,324	-		Echvi_3363	0.75	-0.3
3,970,339	-		Echvi_3363	0.77	+1.9
3,970,350	-		Echvi_3363	0.78	-0.1
3,970,362	-		Echvi_3363	0.79	+1.9
3,970,362	-		Echvi_3363	0.79	-0.1
3,970,410	+		Echvi_3363	0.84	+0.1
3,970,411	-		Echvi_3363	0.84	+0.6
3,970,411	-		Echvi_3363	0.84	-0.3
3,970,449	-		Echvi_3363	0.88	-0.0
3,970,449	-		Echvi_3363	0.88	-0.6
3,970,449	-		Echvi_3363	0.88	+0.9
3,970,455	+		Echvi_3363	0.89	+0.4
3,970,455	+		Echvi_3363	0.89	+0.4
3,970,455	+		Echvi_3363	0.89	-2.4
3,970,455	+		Echvi_3363	0.89	-1.4
3,970,455	+		Echvi_3363	0.89	+1.0
3,970,456	-		Echvi_3363	0.89	+1.4
3,970,456	-		Echvi_3363	0.89	-0.0
3,970,456	-		Echvi_3363	0.89	+0.2
3,970,458	-		Echvi_3363	0.89	+0.9
3,970,543	+				+1.2
3,970,544	-				-2.4
3,970,544	-				+1.4
3,970,544	-				-0.4
3,970,544	-				+0.0
3,970,554	+				+1.1
3,970,574	+				+0.6
3,970,574	+				-0.4
3,970,575	-				-0.1
3,970,586	-				-0.9
3,970,595	+				+0.1
3,970,596	-				-2.0
3,970,596	-				-1.5
3,970,600	-				-0.5
3,970,600	-				+0.1
3,970,600	-				-0.1
3,970,640	+		Echvi_3364	0.11	+0.9
3,970,641	-		Echvi_3364	0.11	-0.5
3,970,655	-		Echvi_3364	0.13	-0.7
3,970,655	-		Echvi_3364	0.13	+0.5
3,970,726	+		Echvi_3364	0.23	+1.4
3,970,799	+		Echvi_3364	0.32	-0.0
3,970,837	+		Echvi_3364	0.37	-0.4
3,970,837	+		Echvi_3364	0.37	-0.7
3,970,837	+		Echvi_3364	0.37	+0.8
3,970,838	-		Echvi_3364	0.37	+1.2
3,970,838	-		Echvi_3364	0.37	-1.6
3,970,839	+		Echvi_3364	0.37	+0.3
3,970,839	+		Echvi_3364	0.37	-0.5
3,970,839	+		Echvi_3364	0.37	+1.9
3,970,839	+		Echvi_3364	0.37	-0.8
3,970,839	+		Echvi_3364	0.37	-0.2
3,970,840	-		Echvi_3364	0.37	-0.5
3,970,840	-		Echvi_3364	0.37	+0.8
3,970,840	-		Echvi_3364	0.37	+0.5
3,970,840	-		Echvi_3364	0.37	+0.1
3,970,840	-		Echvi_3364	0.37	+1.9
3,970,974	-		Echvi_3364	0.55	+0.4
3,971,017	+		Echvi_3364	0.60	-0.1
3,971,018	-		Echvi_3364	0.61	-0.5
3,971,045	+		Echvi_3364	0.64	-0.1
3,971,054	+		Echvi_3364	0.65	-1.5
3,971,142	+		Echvi_3364	0.77	-0.6
3,971,143	-		Echvi_3364	0.77	-0.4
3,971,155	-		Echvi_3364	0.78	+0.4
3,971,288	-				-0.7
3,971,313	-				+0.0
3,971,313	-				+0.6
3,971,313	-				-0.6
3,971,356	-				-0.3
3,971,377	+				+1.6
3,971,378	-				-0.7
3,971,424	-				-0.3
3,971,526	+				-0.1
3,971,527	-				-0.2
3,971,527	-				+1.0