Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3320

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
3,922,334	+		Echvi_3319	0.51	+0.1
3,922,334	+		Echvi_3319	0.51	+0.2
3,922,341	-		Echvi_3319	0.51	-0.1
3,922,341	-		Echvi_3319	0.51	-1.6
3,922,341	-		Echvi_3319	0.51	-0.7
3,922,393	+		Echvi_3319	0.54	-1.1
3,922,393	+		Echvi_3319	0.54	+0.1
3,922,393	+		Echvi_3319	0.54	-1.2
3,922,393	+		Echvi_3319	0.54	-0.2
3,922,393	+		Echvi_3319	0.54	-1.3
3,922,394	-		Echvi_3319	0.54	-0.6
3,922,460	+		Echvi_3319	0.58	+0.6
3,922,473	+		Echvi_3319	0.59	+0.2
3,922,474	-		Echvi_3319	0.59	-0.9
3,922,474	-		Echvi_3319	0.59	+0.9
3,922,486	+		Echvi_3319	0.60	-0.3
3,922,509	+		Echvi_3319	0.61	+1.1
3,922,509	+		Echvi_3319	0.61	+1.4
3,922,509	+		Echvi_3319	0.61	-0.4
3,922,510	-		Echvi_3319	0.61	-1.4
3,922,561	+		Echvi_3319	0.65	-1.1
3,922,562	-		Echvi_3319	0.65	+0.6
3,922,562	-		Echvi_3319	0.65	+1.1
3,922,665	+		Echvi_3319	0.71	+1.9
3,922,666	-		Echvi_3319	0.71	+1.4
3,922,698	-		Echvi_3319	0.73	+0.1
3,922,703	+		Echvi_3319	0.73	+0.4
3,922,703	+		Echvi_3319	0.73	+0.5
3,922,703	+		Echvi_3319	0.73	-2.2
3,922,703	+		Echvi_3319	0.73	+0.9
3,922,729	-		Echvi_3319	0.75	-0.2
3,922,785	+		Echvi_3319	0.78	+0.6
3,922,785	+		Echvi_3319	0.78	+1.3
3,922,789	+		Echvi_3319	0.78	+0.8
3,922,790	-		Echvi_3319	0.78	-1.1
3,922,790	-		Echvi_3319	0.78	-0.5
3,922,796	+		Echvi_3319	0.79	-0.3
3,922,805	-		Echvi_3319	0.79	-1.2
3,922,820	+		Echvi_3319	0.80	-0.3
3,922,821	-		Echvi_3319	0.80	-2.1
3,922,852	+		Echvi_3319	0.82	-0.0
3,922,874	+		Echvi_3319	0.83	+1.5
3,922,889	+		Echvi_3319	0.84	+0.1
3,922,890	-		Echvi_3319	0.84	+0.3
3,923,025	-				+0.0
3,923,064	+				+0.8
3,923,065	-				-1.9
3,923,105	+				-2.2
3,923,106	-				+0.1
3,923,106	-				+1.1
3,923,118	-				-0.1
3,923,118	-				+0.4
3,923,136	-				-0.2
3,923,136	-				-0.4
3,923,225	-				-1.2
3,923,277	-				-0.3
3,923,279	+				+0.4
3,923,279	+				+0.2
3,923,280	-				+0.7
3,923,280	-				+0.0
3,923,280	-				-1.6
3,923,280	-				-1.1
3,923,301	+				-0.7
3,923,302	-				-1.3
3,923,302	-				+0.9
3,923,322	-				-0.3
3,923,353	-				+2.2
3,923,365	+				+1.7
3,923,366	-				+0.3
3,923,368	+				-2.1
3,923,399	-		Echvi_3320	0.12	-0.5
3,923,595	+		Echvi_3320	0.36	+0.9
3,923,595	+		Echvi_3320	0.36	-0.6
3,923,596	-		Echvi_3320	0.36	+0.9
3,923,684	+		Echvi_3320	0.47	+0.6
3,923,685	-		Echvi_3320	0.47	-1.2
3,923,876	-		Echvi_3320	0.70	+0.3
3,923,876	-		Echvi_3320	0.70	+2.1
3,923,878	-		Echvi_3320	0.71	+0.0
3,923,878	-		Echvi_3320	0.71	+0.4
3,923,878	-		Echvi_3320	0.71	+1.0
3,923,878	-		Echvi_3320	0.71	+1.3
3,923,878	-		Echvi_3320	0.71	+0.3
3,923,886	+		Echvi_3320	0.72	+0.2
3,923,887	-		Echvi_3320	0.72	-0.2
3,924,033	-		Echvi_3320	0.90	-0.1
3,924,160	+				-0.1
3,924,182	+				-0.9
3,924,214	+				+0.7
3,924,397	-				-0.7
3,924,397	-				-0.4
3,924,417	-				+1.0
3,924,417	-				+0.1
3,924,498	+		Echvi_3321	0.12	-1.4
3,924,499	-		Echvi_3321	0.12	+0.5
3,924,500	+		Echvi_3321	0.12	+0.1
3,924,573	-		Echvi_3321	0.15	-0.7
3,924,605	-		Echvi_3321	0.17	-0.1
3,924,606	+		Echvi_3321	0.17	-1.0
3,924,607	-		Echvi_3321	0.17	+0.3
3,924,607	-		Echvi_3321	0.17	-0.4
3,924,640	-		Echvi_3321	0.18	-1.2
3,924,646	-		Echvi_3321	0.18	-0.7
3,924,648	-		Echvi_3321	0.18	-0.9
3,924,781	+		Echvi_3321	0.24	-1.6
3,924,781	+		Echvi_3321	0.24	+0.7
3,924,782	-		Echvi_3321	0.24	-0.3
3,924,782	-		Echvi_3321	0.24	+0.3
3,924,782	-		Echvi_3321	0.24	+0.2
3,924,782	-		Echvi_3321	0.24	+2.4
3,924,788	-		Echvi_3321	0.24	-2.2
3,924,837	+		Echvi_3321	0.26	+0.4
3,924,838	-		Echvi_3321	0.26	+0.2
3,924,852	+		Echvi_3321	0.27	-0.3
3,924,852	+		Echvi_3321	0.27	+1.1
3,924,853	-		Echvi_3321	0.27	+0.4
3,924,853	-		Echvi_3321	0.27	-1.7
3,924,908	-		Echvi_3321	0.29	-0.1
3,924,908	-		Echvi_3321	0.29	-0.1
3,924,923	+		Echvi_3321	0.29	-0.4
3,924,924	-		Echvi_3321	0.29	+0.2
3,924,924	-		Echvi_3321	0.29	+0.5
3,924,995	-		Echvi_3321	0.32	-0.4
3,924,995	-		Echvi_3321	0.32	-0.5
3,925,093	+		Echvi_3321	0.36	+0.2
3,925,093	+		Echvi_3321	0.36	+0.6
3,925,103	+		Echvi_3321	0.37	-0.2