Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3193

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
3,793,758	-		Echvi_3191	0.81	-0.3
3,793,796	-				-0.4
3,793,831	-				+1.0
3,793,841	+				+1.5
3,793,944	-		Echvi_3192	0.16	-1.9
3,793,944	-		Echvi_3192	0.16	+1.3
3,793,944	-		Echvi_3192	0.16	-1.2
3,793,966	-		Echvi_3192	0.18	-0.2
3,794,008	-		Echvi_3192	0.23	-0.2
3,794,009	+		Echvi_3192	0.23	-2.0
3,794,009	+		Echvi_3192	0.23	-1.5
3,794,027	+		Echvi_3192	0.26	+0.8
3,794,094	+		Echvi_3192	0.34	-0.2
3,794,112	+		Echvi_3192	0.36	+1.4
3,794,134	-		Echvi_3192	0.39	-2.6
3,794,134	-		Echvi_3192	0.39	-2.2
3,794,152	-		Echvi_3192	0.41	+0.0
3,794,207	+		Echvi_3192	0.48	-0.7
3,794,230	-		Echvi_3192	0.50	-2.2
3,794,290	-		Echvi_3192	0.58	-0.3
3,794,311	-		Echvi_3192	0.60	+0.4
3,794,383	+		Echvi_3192	0.69	+0.5
3,794,384	-		Echvi_3192	0.69	-0.2
3,794,426	-		Echvi_3192	0.74	-0.9
3,794,426	-		Echvi_3192	0.74	+0.0
3,794,436	-		Echvi_3192	0.75	+0.5
3,794,436	-		Echvi_3192	0.75	+1.3
3,794,467	+		Echvi_3192	0.79	+1.2
3,794,470	-		Echvi_3192	0.80	+0.5
3,794,495	-		Echvi_3192	0.83	-1.0
3,794,495	-		Echvi_3192	0.83	-2.1
3,794,523	+		Echvi_3192	0.86	-0.1
3,794,555	-				-0.1
3,794,575	+				-0.6
3,794,575	+				+3.2
3,794,576	-				+0.5
3,794,581	+				-0.2
3,794,582	-				+1.0
3,794,582	-				-1.2
3,794,615	+				+0.8
3,794,615	+				-0.1
3,794,616	-				-0.8
3,794,616	-				-0.4
3,794,738	+		Echvi_3193	0.12	-1.2
3,794,769	-		Echvi_3193	0.26	-1.7
3,794,974	+				-1.2
3,794,999	+				-1.5
3,794,999	+				-2.3
3,795,000	-				-1.0
3,795,000	-				+1.8
3,795,014	-				-0.9
3,795,028	-				+0.2
3,795,029	+				+0.5
3,795,103	+				+0.6
3,795,178	-		Echvi_3194	0.17	+0.2
3,795,462	-		Echvi_3194	0.74	-1.6
3,795,462	-		Echvi_3194	0.74	-0.5
3,795,463	+		Echvi_3194	0.74	-0.7
3,795,463	+		Echvi_3194	0.74	+0.0
3,795,463	+		Echvi_3194	0.74	+1.5
3,795,464	-		Echvi_3194	0.74	+0.7
3,795,465	+		Echvi_3194	0.74	+0.3
3,795,466	-		Echvi_3194	0.75	+1.0
3,795,466	-		Echvi_3194	0.75	-0.2
3,795,466	-		Echvi_3194	0.75	-0.7
3,795,466	-		Echvi_3194	0.75	-1.4
3,795,467	+		Echvi_3194	0.75	-0.2
3,795,467	+		Echvi_3194	0.75	-0.5
3,795,467	+		Echvi_3194	0.75	+1.0
3,795,467	+		Echvi_3194	0.75	+0.0
3,795,467	+		Echvi_3194	0.75	+1.8
3,795,467	+		Echvi_3194	0.75	-0.7
3,795,467	+		Echvi_3194	0.75	-0.5
3,795,468	-		Echvi_3194	0.75	-1.0
3,795,468	-		Echvi_3194	0.75	-0.3
3,795,468	-		Echvi_3194	0.75	-0.2
3,795,468	-		Echvi_3194	0.75	-1.7
3,795,496	+		Echvi_3194	0.81	-0.1
3,795,496	+		Echvi_3194	0.81	-0.4
3,795,523	+		Echvi_3194	0.86	+1.7
3,795,531	-		Echvi_3194	0.88	-0.2
3,795,578	+				-1.2
3,795,588	+				-0.0
3,795,588	+				+0.3
3,795,589	-				-0.3
3,795,596	-				-1.0
3,795,596	-				-0.6
3,795,608	-				+1.8
3,795,608	-				+0.7
3,795,608	-				+1.6
3,795,640	-				+0.4
3,795,640	-				+0.8
3,795,662	+		Echvi_3195	0.14	+1.4
3,795,696	+		Echvi_3195	0.30	-0.1
3,795,726	-		Echvi_3195	0.44	+0.1
3,795,860	-				-0.2
3,795,889	+				+1.0
3,795,890	-				-0.3
3,795,890	-				+0.3
3,795,923	-				-0.2
3,795,923	-				+2.3