Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3055

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
3,646,912	+				+1.8
3,646,944	+		Echvi_3053	0.10	+0.3
3,646,945	-		Echvi_3053	0.11	+1.8
3,646,945	-		Echvi_3053	0.11	-1.8
3,646,947	+		Echvi_3053	0.11	-0.8
3,647,076	-		Echvi_3053	0.52	-0.6
3,647,078	+		Echvi_3053	0.53	-1.9
3,647,078	+		Echvi_3053	0.53	+0.2
3,647,095	+		Echvi_3053	0.58	-0.5
3,647,096	-		Echvi_3053	0.59	-0.9
3,647,096	-		Echvi_3053	0.59	+0.5
3,647,184	+		Echvi_3053	0.87	-1.2
3,647,184	+		Echvi_3053	0.87	+0.1
3,647,248	+				+1.2
3,647,278	+				+0.2
3,647,278	+				+1.8
3,647,299	+				-0.8
3,647,328	+				+0.5
3,647,329	-				-2.6
3,647,336	+				+0.2
3,647,336	+				-0.3
3,647,337	-				-1.2
3,647,343	+				+1.1
3,647,344	-				+1.0
3,647,344	-				-1.2
3,647,347	+				-1.2
3,647,347	+				+0.2
3,647,347	+				+0.0
3,647,393	-		Echvi_3054	0.17	-2.1
3,647,401	-		Echvi_3054	0.18	+0.3
3,647,413	+		Echvi_3054	0.21	-0.0
3,647,465	+		Echvi_3054	0.30	-1.8
3,647,466	-		Echvi_3054	0.30	-0.7
3,647,565	-		Echvi_3054	0.48	+0.7
3,647,579	+		Echvi_3054	0.50	+0.2
3,647,579	+		Echvi_3054	0.50	-0.6
3,647,623	+		Echvi_3054	0.58	-1.4
3,647,663	+		Echvi_3054	0.65	+0.4
3,647,672	+		Echvi_3054	0.67	+0.9
3,647,672	+		Echvi_3054	0.67	+0.0
3,647,698	-		Echvi_3054	0.72	-0.8
3,647,720	-				+0.8
3,647,781	-		Echvi_3054	0.87	-2.6
3,647,799	+		Echvi_3054	0.90	-1.9
3,647,800	-				+0.2
3,647,862	-				-1.0
3,647,862	-				+1.8
3,647,876	-				-1.6
3,647,881	+				-0.9
3,647,886	+				+0.5
3,647,887	-				+0.9
3,648,020	+		Echvi_3055	0.22	-0.3
3,648,020	+		Echvi_3055	0.22	+0.2
3,648,030	+		Echvi_3055	0.24	+1.0
3,648,077	+		Echvi_3055	0.30	+1.8
3,648,078	-		Echvi_3055	0.30	-1.1
3,648,169	+		Echvi_3055	0.43	-1.1
3,648,170	-		Echvi_3055	0.43	+0.8
3,648,180	+		Echvi_3055	0.45	-0.9
3,648,181	-		Echvi_3055	0.45	-1.2
3,648,181	-		Echvi_3055	0.45	-2.9
3,648,253	-		Echvi_3055	0.55	-0.7
3,648,253	-		Echvi_3055	0.55	+1.8
3,648,402	+		Echvi_3055	0.76	-0.5
3,648,562	+				-1.8
3,648,614	-				-0.1
3,648,668	-				+0.6
3,648,919	-		Echvi_3056	0.14	+0.5
3,648,919	-		Echvi_3056	0.14	+0.2